BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037118
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590567.1| Pentatricopeptide repeat-containing protein ...   141   5e-32
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]   140   8e-32
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002520950.1| pentatricopeptide repeat-containing protein,...   140   1e-31
ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31

>ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479615|gb|AES60818.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  141 bits (356), Expect = 5e-32
 Identities = 63/92 (68%), Positives = 74/92 (80%)
 Frame = +3

Query: 3   EIMKTDYNLEPWPEHYACLVDLLGRAKCLNEAYDFVNKMPIEPTAAIWCALLGACRVHSD 182
           EIMK +Y LEPWPEHYACLVDLL R+  L EAY FV  MPIEP+A +WCALLGACR+HS+
Sbjct: 678 EIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSN 737

Query: 183 NSLGENVARKLLELEPQNPGNYVLASNVFASN 278
           N LGE  A+KLL+L  +N GNYVL SN FA++
Sbjct: 738 NDLGEVAAKKLLQLNTENSGNYVLVSNTFAAD 769


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/91 (68%), Positives = 75/91 (82%)
 Frame = +3

Query: 3   EIMKTDYNLEPWPEHYACLVDLLGRAKCLNEAYDFVNKMPIEPTAAIWCALLGACRVHSD 182
           E MK +Y LEPWPEHYACLVDLLGRA  L EAY FV  M +EPTA +WCALLGAC++HS+
Sbjct: 709 ESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSN 768

Query: 183 NSLGENVARKLLELEPQNPGNYVLASNVFAS 275
             LGE  A+KLLE++P+NPGNYVL SNV+++
Sbjct: 769 KELGEIAAQKLLEMDPENPGNYVLVSNVYSA 799


>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Vitis vinifera]
          Length = 993

 Score =  140 bits (353), Expect = 1e-31
 Identities = 62/91 (68%), Positives = 74/91 (81%)
 Frame = +3

Query: 3    EIMKTDYNLEPWPEHYACLVDLLGRAKCLNEAYDFVNKMPIEPTAAIWCALLGACRVHSD 182
            E MK +Y LEPWPEHY CLVDLLGRA  L EAY FV  M +EPTA +WCALLGAC++HS+
Sbjct: 745  ESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSN 804

Query: 183  NSLGENVARKLLELEPQNPGNYVLASNVFAS 275
              LGE  A+KLLE++P+NPGNYVL SNV+A+
Sbjct: 805  KELGEIAAQKLLEMDPENPGNYVLVSNVYAA 835


>ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539787|gb|EEF41367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/92 (68%), Positives = 70/92 (76%)
 Frame = +3

Query: 3   EIMKTDYNLEPWPEHYACLVDLLGRAKCLNEAYDFVNKMPIEPTAAIWCALLGACRVHSD 182
           EIMK +Y LEPWPEHY CLVDLLGR  CL EAY  V  M  EPT  +WCALLGACR+HS+
Sbjct: 587 EIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSN 646

Query: 183 NSLGENVARKLLELEPQNPGNYVLASNVFASN 278
             +GE  A KLLEL+  NPGNYVL SNVFA+N
Sbjct: 647 KEIGEVAAEKLLELDLDNPGNYVLVSNVFAAN 678


>ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|222856250|gb|EEE93797.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/92 (68%), Positives = 73/92 (79%)
 Frame = +3

Query: 3   EIMKTDYNLEPWPEHYACLVDLLGRAKCLNEAYDFVNKMPIEPTAAIWCALLGACRVHSD 182
           E MK  Y LEPWPEHYACLVDLLGRA  L EAY FV  M IEPTA +WCA LGACR+HS+
Sbjct: 539 ETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSN 598

Query: 183 NSLGENVARKLLELEPQNPGNYVLASNVFASN 278
             LGE  A+KLL+L+P +PG+YVL SNVFA++
Sbjct: 599 KKLGEIAAQKLLDLDPDSPGSYVLISNVFAAS 630