BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037105
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX92970.1| retrotransposon protein, putative, unclassified [...    73   3e-11
gb|EAZ18121.1| hypothetical protein OsJ_33666 [Oryza sativa Japo...    73   3e-11
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    71   1e-10
gb|EEC68026.1| hypothetical protein OsI_35837 [Oryza sativa Indi...    69   3e-10
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    69   5e-10

>gb|AAX92970.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|62733927|gb|AAX96036.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group] gi|77550044|gb|ABA92841.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 796

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/96 (41%), Positives = 60/96 (62%)
 Frame = -1

Query: 288 ALRIWNRTTFGNIHRHITITQQNIEILNSRISNKQNLFLQKNESDHLDYLLACEEKLWKQ 109
           ALR+W+RT F NI R +   ++N+  L +  S++  L   +  +DH++ LL  EE LW Q
Sbjct: 152 ALRLWSRTKFKNIGRELEKARKNLARLQASNSDRTEL---RRATDHMNELLYREEMLWLQ 208

Query: 108 KSRDKDLIEGDRNTKYFHIKTLRHRKYNKIEWLKNS 1
            SR   L EGDRNTK+FH +++   K N+I  L++S
Sbjct: 209 CSRISWLKEGDRNTKFFHSRSVWRAKKNRISKLRDS 244


>gb|EAZ18121.1| hypothetical protein OsJ_33666 [Oryza sativa Japonica Group]
          Length = 547

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/96 (41%), Positives = 60/96 (62%)
 Frame = -1

Query: 288 ALRIWNRTTFGNIHRHITITQQNIEILNSRISNKQNLFLQKNESDHLDYLLACEEKLWKQ 109
           ALR+W+RT F NI R +   ++N+  L +  S++  L   +  +DH++ LL  EE LW Q
Sbjct: 152 ALRLWSRTKFKNIGRELEKARKNLARLQASNSDRTEL---RRATDHMNELLYREEMLWLQ 208

Query: 108 KSRDKDLIEGDRNTKYFHIKTLRHRKYNKIEWLKNS 1
            SR   L EGDRNTK+FH +++   K N+I  L++S
Sbjct: 209 CSRISWLKEGDRNTKFFHSRSVWRAKKNRISKLRDS 244


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
 Frame = -1

Query: 294 KKALRIWNRTTFGNIHRHITITQQNIEILNSRIS-NKQNLFLQKNES--DHLDYLLACEE 124
           K  L+ WNR  FG+++R        I+++   +  N+ +  L K E      D +L  EE
Sbjct: 691 KSKLKKWNREVFGDVNRRKESLMNEIKVVQELLEINQTDNLLSKEEELIKEFDVVLEQEE 750

Query: 123 KLWKQKSRDKDLIEGDRNTKYFHIKTLRHRKYNKIEWLK 7
            LW QKSR+K +  GDRNTKYFH  T+  R+ N+IE LK
Sbjct: 751 VLWFQKSREKWVELGDRNTKYFHTMTVVRRRRNRIEMLK 789


>gb|EEC68026.1| hypothetical protein OsI_35837 [Oryza sativa Indica Group]
          Length = 819

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/96 (40%), Positives = 59/96 (61%)
 Frame = -1

Query: 288 ALRIWNRTTFGNIHRHITITQQNIEILNSRISNKQNLFLQKNESDHLDYLLACEEKLWKQ 109
           ALR+W+RT F NI R +   ++ +  L +  S++  L   +  +DH++ LL  EE LW Q
Sbjct: 152 ALRLWSRTKFKNIGRELEKARKILARLQASNSDRTEL---RRATDHMNELLYREEMLWLQ 208

Query: 108 KSRDKDLIEGDRNTKYFHIKTLRHRKYNKIEWLKNS 1
            SR   L EGDRNTK+FH +++   K N+I  L++S
Sbjct: 209 CSRISWLKEGDRNTKFFHSRSVWRAKKNRISKLRDS 244


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
 Frame = -1

Query: 297 TKKALRIWNRTTFGNIHRHITITQQNIEILNSRISNKQNLFLQKNES---DHLDYLLACE 127
           +K+ L+ WN+  FGNI +      Q I+ +   + + Q   L   E       + +L  E
Sbjct: 246 SKEKLKKWNKEVFGNIQQRKDKLVQEIQAVQDFLEHNQTDDLLNKEDVLIKEFEVVLEQE 305

Query: 126 EKLWKQKSRDKDLIEGDRNTKYFHIKTLRHRKYNKIEWLKN 4
           E +W QKSR+K +  GDRNTKYFH  T+  R+ N+IE LK+
Sbjct: 306 EIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKD 346