BLASTX nr result

ID: Coptis21_contig00037102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037102
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]      56   3e-06
gb|AAN72199.1| putative helicase [Arabidopsis thaliana]                55   5e-06
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...    55   5e-06
gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana]      55   5e-06
ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis...    55   5e-06

>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
          Length = 823

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +2

Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358
           E   +D I+LLNERIRRDL KRE     +   ++SEEA+KYIQ+VKEQQ+
Sbjct: 67  EFAENDSISLLNERIRRDLGKRE----TSRPAMDSEEADKYIQMVKEQQE 112


>gb|AAN72199.1| putative helicase [Arabidopsis thaliana]
          Length = 822

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +2

Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358
           E    D I+LLNERIRRDL KRE A       ++SEEAEKYI +VKEQQ+
Sbjct: 66  ELAESDSISLLNERIRRDLGKRETA----RPAMDSEEAEKYIHMVKEQQE 111


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
           helicase [Arabidopsis thaliana]
          Length = 823

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +2

Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358
           E    D I+LLNERIRRDL KRE A       ++SEEAEKYI +VKEQQ+
Sbjct: 67  ELAESDSISLLNERIRRDLGKRETA----RPAMDSEEAEKYIHMVKEQQE 112


>gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana]
          Length = 823

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +2

Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358
           E    D I+LLNERIRRDL KRE A       ++SEEAEKYI +VKEQQ+
Sbjct: 67  ELAESDSISLLNERIRRDLGKRETA----RPAMDSEEAEKYIHMVKEQQE 112


>ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|6513947|gb|AAF14851.1|AC011664_33 putative helicase
           [Arabidopsis thaliana] gi|332640234|gb|AEE73755.1|
           putative DEAD/DEAH box helicase [Arabidopsis thaliana]
          Length = 822

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +2

Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358
           E    D I+LLNERIRRDL KRE A       ++SEEAEKYI +VKEQQ+
Sbjct: 66  ELAESDSISLLNERIRRDLGKRETA----RPAMDSEEAEKYIHMVKEQQE 111


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