BLASTX nr result
ID: Coptis21_contig00037102
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037102 (360 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila] 56 3e-06 gb|AAN72199.1| putative helicase [Arabidopsis thaliana] 55 5e-06 ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th... 55 5e-06 gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana] 55 5e-06 ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis... 55 5e-06 >dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila] Length = 823 Score = 56.2 bits (134), Expect = 3e-06 Identities = 29/50 (58%), Positives = 37/50 (74%) Frame = +2 Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358 E +D I+LLNERIRRDL KRE + ++SEEA+KYIQ+VKEQQ+ Sbjct: 67 EFAENDSISLLNERIRRDLGKRE----TSRPAMDSEEADKYIQMVKEQQE 112 >gb|AAN72199.1| putative helicase [Arabidopsis thaliana] Length = 822 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/50 (60%), Positives = 35/50 (70%) Frame = +2 Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358 E D I+LLNERIRRDL KRE A ++SEEAEKYI +VKEQQ+ Sbjct: 66 ELAESDSISLLNERIRRDLGKRETA----RPAMDSEEAEKYIHMVKEQQE 111 >ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana] gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana] Length = 823 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/50 (60%), Positives = 35/50 (70%) Frame = +2 Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358 E D I+LLNERIRRDL KRE A ++SEEAEKYI +VKEQQ+ Sbjct: 67 ELAESDSISLLNERIRRDLGKRETA----RPAMDSEEAEKYIHMVKEQQE 112 >gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana] Length = 823 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/50 (60%), Positives = 35/50 (70%) Frame = +2 Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358 E D I+LLNERIRRDL KRE A ++SEEAEKYI +VKEQQ+ Sbjct: 67 ELAESDSISLLNERIRRDLGKRETA----RPAMDSEEAEKYIHMVKEQQE 112 >ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana] gi|6513947|gb|AAF14851.1|AC011664_33 putative helicase [Arabidopsis thaliana] gi|332640234|gb|AEE73755.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana] Length = 822 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/50 (60%), Positives = 35/50 (70%) Frame = +2 Query: 209 ESTSDDGITLLNERIRRDLSKREGASRNNNNTLNSEEAEKYIQLVKEQQQ 358 E D I+LLNERIRRDL KRE A ++SEEAEKYI +VKEQQ+ Sbjct: 66 ELAESDSISLLNERIRRDLGKRETA----RPAMDSEEAEKYIHMVKEQQE 111