BLASTX nr result

ID: Coptis21_contig00037088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037088
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76493.1| hypothetical protein VITISV_007584 [Vitis vinifera]    62   5e-08
emb|CCH50966.1| T4.5 [Malus x robusta]                                 59   3e-07
gb|AAU90288.2| Polyprotein, putative [Solanum demissum]                59   5e-07
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]    58   7e-07
emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]    57   1e-06

>emb|CAN76493.1| hypothetical protein VITISV_007584 [Vitis vinifera]
          Length = 1120

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/82 (39%), Positives = 46/82 (56%)
 Frame = -1

Query: 253 TAPPPITEHHMTTRIKDGVKLLNRARYADFATRHPIPAAFSMQLSRETEPSCFSQAQKSP 74
           ++PPP     +T  + +    + R +     T+HP+P           EPSC SQA K P
Sbjct: 701 SSPPPCPRTIITRSMNN----IFRPKQLHTTTKHPLP--------EPPEPSCVSQALKDP 748

Query: 73  HWRQAMNEEFNALLKNGTWSLV 8
           HWR+AM+EE  +LL++GTW LV
Sbjct: 749 HWRKAMSEEVTSLLQHGTWELV 770


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/80 (40%), Positives = 39/80 (48%)
 Frame = -1

Query: 247  PPPITEHHMTTRIKDGVKLLNRARYADFATRHPIPAAFSMQLSRETEPSCFSQAQKSPHW 68
            P P+  H M TR K G+           AT+H +P+      +    PS F QA KS HW
Sbjct: 1106 PIPVNTHTMITRAKAGI----HKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHW 1161

Query: 67   RQAMNEEFNALLKNGTWSLV 8
             +AM  EF AL   GTW LV
Sbjct: 1162 MEAMQFEFQALQSTGTWELV 1181


>gb|AAU90288.2| Polyprotein, putative [Solanum demissum]
          Length = 1017

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/81 (34%), Positives = 42/81 (51%)
 Frame = -1

Query: 250 APPPITEHHMTTRIKDGVKLLNRARYADFATRHPIPAAFSMQLSRETEPSCFSQAQKSPH 71
           +P  + E+  ++         N +       + P   + +   S   EPSC S+A K  H
Sbjct: 588 SPSVVAENPHSSNTSHSGDFGNTSAVGSLKPKKPFSMSTTTPTSAIVEPSCHSRAIKDVH 647

Query: 70  WRQAMNEEFNALLKNGTWSLV 8
           WR AM+EE+NAL++NGTW LV
Sbjct: 648 WRHAMSEEYNALIQNGTWELV 668


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = -1

Query: 244  PPITEHHMTTRIKDGVKLLNRARYADFATRHPIPAAFSMQLSRETEPSCFSQAQKSPHWR 65
            PP T+H MTTR K+ +      +  +  T  P          + T P+  SQA K  +WR
Sbjct: 810  PPPTQHRMTTRAKNNIT--KPIQKLNLHTHKPT--------FQTTTPTSISQALKDQNWR 859

Query: 64   QAMNEEFNALLKNGTWSLV 8
            QAM++E++AL++NGTW LV
Sbjct: 860  QAMSDEYDALVRNGTWELV 878


>emb|CAN82380.1| hypothetical protein VITISV_021579 [Vitis vinifera]
          Length = 828

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/80 (40%), Positives = 40/80 (50%)
 Frame = -1

Query: 247 PPPITEHHMTTRIKDGVKLLNRARYADFATRHPIPAAFSMQLSRETEPSCFSQAQKSPHW 68
           P P+  H M TR K G+      +   F  +H             TEP  +SQA K+  W
Sbjct: 732 PLPLNTHPMVTRAKSGIH-----KKRSFIVQHT------------TEPRTYSQASKNDSW 774

Query: 67  RQAMNEEFNALLKNGTWSLV 8
            QAMN E+ ALL+N TWSLV
Sbjct: 775 VQAMNREYQALLRNNTWSLV 794


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