BLASTX nr result

ID: Coptis21_contig00037084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037084
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302169.1| cellulose synthase [Populus trichocarpa] gi|...   186   6e-52
gb|AFZ78560.1| cellulose synthase [Populus tomentosa]                 186   8e-52
gb|AFZ78561.1| cellulose synthase [Populus tomentosa]                 181   1e-50
ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic su...   180   1e-50
emb|CBI18221.3| unnamed protein product [Vitis vinifera]              180   1e-50

>ref|XP_002302169.1| cellulose synthase [Populus trichocarpa] gi|222843895|gb|EEE81442.1|
            cellulose synthase [Populus trichocarpa]
          Length = 1093

 Score =  186 bits (471), Expect(2) = 6e-52
 Identities = 86/99 (86%), Positives = 92/99 (92%)
 Frame = -3

Query: 298  RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIYGS 119
            + EKK+GQS VFIASTL+E GG+P+  +SASLLKEAIHVISCGYEDKT WGKEIGWIYGS
Sbjct: 731  KFEKKFGQSSVFIASTLMEDGGVPKGASSASLLKEAIHVISCGYEDKTEWGKEIGWIYGS 790

Query: 118  VTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2
            VTEDILTGFKMHCHGWRSVYCMPKRPAF GSAPINLSDR
Sbjct: 791  VTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDR 829



 Score = 43.5 bits (101), Expect(2) = 6e-52
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285
           S+ ASKQIHALENI+E  E  ID E+S LMP+IK  +K
Sbjct: 699 SKDASKQIHALENIEEGIEG-IDNEKSALMPQIKFEKK 735


>gb|AFZ78560.1| cellulose synthase [Populus tomentosa]
          Length = 1093

 Score =  186 bits (472), Expect(2) = 8e-52
 Identities = 87/101 (86%), Positives = 93/101 (92%)
 Frame = -3

Query: 304  R*RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIY 125
            R + EKK+GQS VFIASTL+E GG+P+  +SASLLKEAIHVISCGYEDKT WGKEIGWIY
Sbjct: 729  RIKFEKKFGQSSVFIASTLMEDGGVPKGASSASLLKEAIHVISCGYEDKTEWGKEIGWIY 788

Query: 124  GSVTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2
            GSVTEDILTGFKMHCHGWRSVYCMPKRPAF GSAPINLSDR
Sbjct: 789  GSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDR 829



 Score = 42.7 bits (99), Expect(2) = 8e-52
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = -2

Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285
           S+ ASKQIHALENI+E  E  ID E+S LMP IK  +K
Sbjct: 699 SKDASKQIHALENIEEGIEG-IDNEKSALMPRIKFEKK 735


>gb|AFZ78561.1| cellulose synthase [Populus tomentosa]
          Length = 1097

 Score =  181 bits (460), Expect(2) = 1e-50
 Identities = 84/99 (84%), Positives = 91/99 (91%)
 Frame = -3

Query: 298  RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIYGS 119
            + EKK+GQS VFIA+TL+E GG+P+  +SASLLKEAIHVISCGYEDKT WGKEIGWIYGS
Sbjct: 735  KFEKKFGQSSVFIAATLMEDGGVPKGASSASLLKEAIHVISCGYEDKTEWGKEIGWIYGS 794

Query: 118  VTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2
            VTEDILTGFKMHCHGWRSVYCMPK PAF GSAPINLSDR
Sbjct: 795  VTEDILTGFKMHCHGWRSVYCMPKIPAFKGSAPINLSDR 833



 Score = 43.1 bits (100), Expect(2) = 1e-50
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285
           S+ ASKQIHALENI+E  E  ID E+S LMP+IK  +K
Sbjct: 703 SKEASKQIHALENIEEGIEG-IDNEKSALMPQIKFEKK 739


>ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic subunit 6 [UDP-forming]
            [Vitis vinifera]
          Length = 1096

 Score =  180 bits (456), Expect(2) = 1e-50
 Identities = 83/99 (83%), Positives = 90/99 (90%)
 Frame = -3

Query: 298  RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIYGS 119
            + EKK+GQS VFIASTLLE GG+P+   +ASLLKEAIHVISCGYEDKT WGKE+GWIYGS
Sbjct: 734  KFEKKFGQSPVFIASTLLEEGGVPKGATTASLLKEAIHVISCGYEDKTEWGKEVGWIYGS 793

Query: 118  VTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2
            VTEDILTGFKM CHGWRSVYC+PKRPAF GSAPINLSDR
Sbjct: 794  VTEDILTGFKMQCHGWRSVYCIPKRPAFKGSAPINLSDR 832



 Score = 44.7 bits (104), Expect(2) = 1e-50
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -2

Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285
           +R ASKQIHALENI+E  E  ID +RSLLMP++K  +K
Sbjct: 702 NREASKQIHALENIEEGIEG-IDNDRSLLMPQVKFEKK 738


>emb|CBI18221.3| unnamed protein product [Vitis vinifera]
          Length = 1067

 Score =  180 bits (456), Expect(2) = 1e-50
 Identities = 83/99 (83%), Positives = 90/99 (90%)
 Frame = -3

Query: 298  RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIYGS 119
            + EKK+GQS VFIASTLLE GG+P+   +ASLLKEAIHVISCGYEDKT WGKE+GWIYGS
Sbjct: 734  KFEKKFGQSPVFIASTLLEEGGVPKGATTASLLKEAIHVISCGYEDKTEWGKEVGWIYGS 793

Query: 118  VTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2
            VTEDILTGFKM CHGWRSVYC+PKRPAF GSAPINLSDR
Sbjct: 794  VTEDILTGFKMQCHGWRSVYCIPKRPAFKGSAPINLSDR 832



 Score = 44.7 bits (104), Expect(2) = 1e-50
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = -2

Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285
           +R ASKQIHALENI+E  E  ID +RSLLMP++K  +K
Sbjct: 702 NREASKQIHALENIEEGIEG-IDNDRSLLMPQVKFEKK 738


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