BLASTX nr result
ID: Coptis21_contig00037084
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00037084 (435 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302169.1| cellulose synthase [Populus trichocarpa] gi|... 186 6e-52 gb|AFZ78560.1| cellulose synthase [Populus tomentosa] 186 8e-52 gb|AFZ78561.1| cellulose synthase [Populus tomentosa] 181 1e-50 ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic su... 180 1e-50 emb|CBI18221.3| unnamed protein product [Vitis vinifera] 180 1e-50 >ref|XP_002302169.1| cellulose synthase [Populus trichocarpa] gi|222843895|gb|EEE81442.1| cellulose synthase [Populus trichocarpa] Length = 1093 Score = 186 bits (471), Expect(2) = 6e-52 Identities = 86/99 (86%), Positives = 92/99 (92%) Frame = -3 Query: 298 RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIYGS 119 + EKK+GQS VFIASTL+E GG+P+ +SASLLKEAIHVISCGYEDKT WGKEIGWIYGS Sbjct: 731 KFEKKFGQSSVFIASTLMEDGGVPKGASSASLLKEAIHVISCGYEDKTEWGKEIGWIYGS 790 Query: 118 VTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2 VTEDILTGFKMHCHGWRSVYCMPKRPAF GSAPINLSDR Sbjct: 791 VTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDR 829 Score = 43.5 bits (101), Expect(2) = 6e-52 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -2 Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285 S+ ASKQIHALENI+E E ID E+S LMP+IK +K Sbjct: 699 SKDASKQIHALENIEEGIEG-IDNEKSALMPQIKFEKK 735 >gb|AFZ78560.1| cellulose synthase [Populus tomentosa] Length = 1093 Score = 186 bits (472), Expect(2) = 8e-52 Identities = 87/101 (86%), Positives = 93/101 (92%) Frame = -3 Query: 304 R*RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIY 125 R + EKK+GQS VFIASTL+E GG+P+ +SASLLKEAIHVISCGYEDKT WGKEIGWIY Sbjct: 729 RIKFEKKFGQSSVFIASTLMEDGGVPKGASSASLLKEAIHVISCGYEDKTEWGKEIGWIY 788 Query: 124 GSVTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2 GSVTEDILTGFKMHCHGWRSVYCMPKRPAF GSAPINLSDR Sbjct: 789 GSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDR 829 Score = 42.7 bits (99), Expect(2) = 8e-52 Identities = 24/38 (63%), Positives = 28/38 (73%) Frame = -2 Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285 S+ ASKQIHALENI+E E ID E+S LMP IK +K Sbjct: 699 SKDASKQIHALENIEEGIEG-IDNEKSALMPRIKFEKK 735 >gb|AFZ78561.1| cellulose synthase [Populus tomentosa] Length = 1097 Score = 181 bits (460), Expect(2) = 1e-50 Identities = 84/99 (84%), Positives = 91/99 (91%) Frame = -3 Query: 298 RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIYGS 119 + EKK+GQS VFIA+TL+E GG+P+ +SASLLKEAIHVISCGYEDKT WGKEIGWIYGS Sbjct: 735 KFEKKFGQSSVFIAATLMEDGGVPKGASSASLLKEAIHVISCGYEDKTEWGKEIGWIYGS 794 Query: 118 VTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2 VTEDILTGFKMHCHGWRSVYCMPK PAF GSAPINLSDR Sbjct: 795 VTEDILTGFKMHCHGWRSVYCMPKIPAFKGSAPINLSDR 833 Score = 43.1 bits (100), Expect(2) = 1e-50 Identities = 24/38 (63%), Positives = 29/38 (76%) Frame = -2 Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285 S+ ASKQIHALENI+E E ID E+S LMP+IK +K Sbjct: 703 SKEASKQIHALENIEEGIEG-IDNEKSALMPQIKFEKK 739 >ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic subunit 6 [UDP-forming] [Vitis vinifera] Length = 1096 Score = 180 bits (456), Expect(2) = 1e-50 Identities = 83/99 (83%), Positives = 90/99 (90%) Frame = -3 Query: 298 RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIYGS 119 + EKK+GQS VFIASTLLE GG+P+ +ASLLKEAIHVISCGYEDKT WGKE+GWIYGS Sbjct: 734 KFEKKFGQSPVFIASTLLEEGGVPKGATTASLLKEAIHVISCGYEDKTEWGKEVGWIYGS 793 Query: 118 VTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2 VTEDILTGFKM CHGWRSVYC+PKRPAF GSAPINLSDR Sbjct: 794 VTEDILTGFKMQCHGWRSVYCIPKRPAFKGSAPINLSDR 832 Score = 44.7 bits (104), Expect(2) = 1e-50 Identities = 24/38 (63%), Positives = 30/38 (78%) Frame = -2 Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285 +R ASKQIHALENI+E E ID +RSLLMP++K +K Sbjct: 702 NREASKQIHALENIEEGIEG-IDNDRSLLMPQVKFEKK 738 >emb|CBI18221.3| unnamed protein product [Vitis vinifera] Length = 1067 Score = 180 bits (456), Expect(2) = 1e-50 Identities = 83/99 (83%), Positives = 90/99 (90%) Frame = -3 Query: 298 RMEKKYGQSLVFIASTLLEVGGIPQDVNSASLLKEAIHVISCGYEDKTVWGKEIGWIYGS 119 + EKK+GQS VFIASTLLE GG+P+ +ASLLKEAIHVISCGYEDKT WGKE+GWIYGS Sbjct: 734 KFEKKFGQSPVFIASTLLEEGGVPKGATTASLLKEAIHVISCGYEDKTEWGKEVGWIYGS 793 Query: 118 VTEDILTGFKMHCHGWRSVYCMPKRPAFIGSAPINLSDR 2 VTEDILTGFKM CHGWRSVYC+PKRPAF GSAPINLSDR Sbjct: 794 VTEDILTGFKMQCHGWRSVYCIPKRPAFKGSAPINLSDR 832 Score = 44.7 bits (104), Expect(2) = 1e-50 Identities = 24/38 (63%), Positives = 30/38 (78%) Frame = -2 Query: 398 SRGASKQIHALENIDERNEAEIDGERSLLMPEIKDGEK 285 +R ASKQIHALENI+E E ID +RSLLMP++K +K Sbjct: 702 NREASKQIHALENIEEGIEG-IDNDRSLLMPQVKFEKK 738