BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037065
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514995.1| conserved hypothetical protein [Ricinus comm...    71   1e-10
ref|XP_002318952.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
emb|CAN71689.1| hypothetical protein VITISV_039291 [Vitis vinifera]    63   3e-08
ref|XP_003613186.1| F-box protein [Medicago truncatula] gi|35551...    61   8e-08
ref|XP_003609669.1| F-box protein [Medicago truncatula] gi|35551...    58   9e-07

>ref|XP_002514995.1| conserved hypothetical protein [Ricinus communis]
           gi|223546046|gb|EEF47549.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 26/73 (35%), Positives = 48/73 (65%)
 Frame = +3

Query: 177 MDTIPNDMISTIVAHVAKSSIVDLFSLKQTCKMLYELGDDDFVLQQASLEKIPAVPWRLS 356
           +  +P ++++ I+A VA  S  D F+ K TCK   E   DD++ + AS++  P +PW+++
Sbjct: 22  LSCMPRELLTEILARVASESFTDFFNAKTTCKEFLEAASDDYIFKHASIDCFPVIPWKIT 81

Query: 357 DDAAYFLQRCQQT 395
           DDA+ FL +C+++
Sbjct: 82  DDASTFLDKCKKS 94


>ref|XP_002318952.1| predicted protein [Populus trichocarpa] gi|222857328|gb|EEE94875.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 27/70 (38%), Positives = 48/70 (68%)
 Frame = +3

Query: 189 PNDMISTIVAHVAKSSIVDLFSLKQTCKMLYELGDDDFVLQQASLEKIPAVPWRLSDDAA 368
           P D+++ ++A VA +SI DLF+ K +CK   E   ++++ +  ++EK+P +PWR+S  A+
Sbjct: 18  PKDLLTEVLARVASASISDLFTAKLSCKEFLEAASENYIFEHITIEKLPVIPWRISHGAS 77

Query: 369 YFLQRCQQTG 398
            FL RC++ G
Sbjct: 78  SFLARCKENG 87


>emb|CAN71689.1| hypothetical protein VITISV_039291 [Vitis vinifera]
          Length = 241

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 25/75 (33%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +3

Query: 177 MDTIPNDMISTIVAHVAKSSIVDLFSLKQTCKMLYELGDDDFVLQQASLEKIPAVP-WRL 353
           ++++ +D++  ++  VA SS  DLF+ K +C+   E   D FV++  S+EK P +P W++
Sbjct: 15  IESLSSDLLIEVLTRVASSSFTDLFNAKLSCRNFLEASKDTFVMKNISIEKFPTIPWWQV 74

Query: 354 SDDAAYFLQRCQQTG 398
            D+ + FL+ C+++G
Sbjct: 75  KDEVSSFLKACKESG 89


>ref|XP_003613186.1| F-box protein [Medicago truncatula] gi|355514521|gb|AES96144.1|
           F-box protein [Medicago truncatula]
          Length = 254

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = +3

Query: 189 PNDMISTIVAHVAKSSIVDLFSLKQTCKMLYELGDDDFVLQQASLEKIPAV--PWRLSDD 362
           PND++  IV  VA  S+VDL+ +K +CK      +D FV Q ASL+K   +  PW   + 
Sbjct: 29  PNDLLVDIVGKVASGSMVDLYKIKLSCKEFLSASEDRFVYQHASLDKFALIPLPWFTEEK 88

Query: 363 AAYFLQRCQQTG 398
              FL+RC+++G
Sbjct: 89  ETSFLRRCRESG 100


>ref|XP_003609669.1| F-box protein [Medicago truncatula] gi|355510724|gb|AES91866.1|
           F-box protein [Medicago truncatula]
          Length = 256

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = +3

Query: 183 TIPNDMISTIVAHVAKSSIVDLFSLKQTCKMLYELGDDDFVLQQASLEKIPAV--PWRLS 356
           T+PND++  IV  VA  S+ DL  +K +CK      +D +V Q A+++K   V  PW   
Sbjct: 27  TLPNDLLVNIVGKVASRSMADLCKIKLSCKEFLNASEDGYVYQHAAMDKFALVPLPWFTD 86

Query: 357 DDAAYFLQRCQQTG 398
           +    FL RC+++G
Sbjct: 87  EKETSFLSRCKESG 100