BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037020
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    77   1e-12
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    72   5e-11
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    69   5e-10
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    68   7e-10

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/121 (39%), Positives = 67/121 (55%)
 Frame = -3

Query: 374 DDIIFFNGQFYAIQSMGMLRICEIGEPVPKTIDFLPPPEDIVENETQSDRFYLVEISGHL 195
           +D+I+FNG FYA+   G + +C++    PK + F+  P  I       D  YLV     L
Sbjct: 214 EDVIYFNGLFYAVNKAGQIVVCDVNGNSPK-VSFIETPRQI-----GGDMQYLVSSGDGL 267

Query: 194 HLVSRGLDKDMNAPEGVFRYVTDWFDVYKLDFHAKKWINLTDFGDYSLFIGTNSSFAIST 15
            LV+R LD D+     +F Y T  F+V+KLD +  +W  +T  GD  LFIG NSS A+S 
Sbjct: 268 LLVTRYLDLDVEFD--IFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSA 325

Query: 14  S 12
           S
Sbjct: 326 S 326


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
 Frame = -3

Query: 374 DDIIFFNGQFYAIQSMGMLRICEIGEPVPKTIDFLPPPEDIVENETQSDRFYLVEISGHL 195
           +D+IF NG FYA+   G + IC+I    P+ + F+  P      +   D  YLV     L
Sbjct: 213 EDVIFVNGMFYAVNKAGQIVICDISSDSPR-VSFMETPR-----QAGGDMQYLVNSGDEL 266

Query: 194 HLVSRGLDKDMN------APEGVFRYVTDWFDVYKLDFHAKKWINLTDFGDYSLFIGTNS 33
            LV+R LD +         P  ++R +   F+V++LD++  +W+ ++  GD +LFIG NS
Sbjct: 267 LLVTRYLDLEYEFDHPDMEPHLIYRTIR--FEVFRLDWNGPQWLRMSTLGDKALFIGENS 324

Query: 32  SFAISTSEY 6
           S ++S +++
Sbjct: 325 SLSLSATDF 333


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
 Frame = -3

Query: 374  DDIIFFNGQFYAIQSMGMLRICEIGEPVPKTIDFLPPPEDIVENETQSDRFYLVEISGHL 195
            DDII+FNG F A+     + IC+I     KTI F   P     +E + +  YLVE  G +
Sbjct: 1110 DDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEI 1169

Query: 194  HLVSRGLDKDMNAPEGVFRYVTDW-FDVYKLDFHAKKWINLTDFGDYSLFIGTNSSFAIS 18
            ++V+R L    +       Y+  W F V KLD   K+W  + +    S F+G N SF+  
Sbjct: 1170 YMVTRNL---YDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTW 1226

Query: 17   TSEYP 3
             S+YP
Sbjct: 1227 ASDYP 1231


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
 Frame = -3

Query: 386 QQAHDDIIFFNGQFYAIQSMGMLRICEIGEPVPKTIDFLPPPEDIVENETQ--SDRFYLV 213
           Q   +D+IF  G FYA+   G + +C++    P+          I+E   Q   D  YLV
Sbjct: 206 QSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRV--------SIIEMPQQFGGDLQYLV 257

Query: 212 EISGHLHLVSRGLDK--DMNAPEGVFRYVTDWFDVYKLDFHAKKWINLTDFGDYSLFIGT 39
           E    L LV+R LD   D+   +    Y T  F V +LD  A +W  ++  GD +LF+G 
Sbjct: 258 ESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGE 317

Query: 38  NSSFAISTSEYP 3
           N S ++S+ ++P
Sbjct: 318 NLSLSLSSVDFP 329


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
 Frame = -3

Query: 386 QQAHDDIIFFNGQFYAIQSMGMLRICEIGEPVPKTIDFLPPPEDIVENETQ--SDRFYLV 213
           Q   +D+IF  G FYA+   G + +C++    P+          I+E   Q   D  YLV
Sbjct: 206 QSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRV--------SIIEMPQQFGGDLQYLV 257

Query: 212 EISGHLHLVSRGLDK--DMNAPEGVFRYVTDWFDVYKLDFHAKKWINLTDFGDYSLFIGT 39
           E    L LV+R LD   D+   +    Y T  F V +LD  A +W  ++  GD +LF+G 
Sbjct: 258 ESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGE 317

Query: 38  NSSFAISTSEYP 3
           N S ++S+ ++P
Sbjct: 318 NLSLSLSSVDFP 329