BLASTX nr result

ID: Coptis21_contig00036904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036904
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM64819.1| hypothetical protein [Beta vulgaris]                  149   3e-34
emb|CBH19893.1| cell division control 20 [Solanum lycopersicum v...   143   2e-32
emb|CBH19894.1| cell division control 20 [Solanum lycopersicum v...   141   5e-32
ref|XP_002319120.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_002520003.1| cell division cycle, putative [Ricinus commu...   140   1e-31

>dbj|BAM64819.1| hypothetical protein [Beta vulgaris]
          Length = 610

 Score =  149 bits (375), Expect = 3e-34
 Identities = 72/95 (75%), Positives = 81/95 (85%)
 Frame = -3

Query: 286 KEAYRKQLAEVFNMNRPRILAFKNKPPPAAESLFPEPASTFHQAKPVKPRRSIPQTSERT 107
           KEAY+KQL EVFNMNR RILAFKNKPP   E + P+  ++  Q+KPVKPRR IPQTSERT
Sbjct: 227 KEAYQKQLREVFNMNRTRILAFKNKPPAPVEFM-PQEYASVQQSKPVKPRRHIPQTSERT 285

Query: 106 LDAPEILDDYYLNLLDWSSSNILAIALGNTVYLWD 2
           LDAP++LDDYYLNLLDW SSN+LAIALG TVYLWD
Sbjct: 286 LDAPDLLDDYYLNLLDWGSSNVLAIALGTTVYLWD 320


>emb|CBH19893.1| cell division control 20 [Solanum lycopersicum var. cerasiforme]
          Length = 453

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/95 (72%), Positives = 78/95 (82%)
 Frame = -3

Query: 286 KEAYRKQLAEVFNMNRPRILAFKNKPPPAAESLFPEPASTFHQAKPVKPRRSIPQTSERT 107
           +EAYRKQLAE FNMNR RILAFKNKPP   E++ P   ++  Q K  KPRR IPQTSERT
Sbjct: 69  REAYRKQLAETFNMNRSRILAFKNKPPTPVEAI-PNEIASVQQNKTAKPRRYIPQTSERT 127

Query: 106 LDAPEILDDYYLNLLDWSSSNILAIALGNTVYLWD 2
           LDAP+I+DDYYLNLLDW SSN+L+IALG TVYLWD
Sbjct: 128 LDAPDIMDDYYLNLLDWGSSNVLSIALGGTVYLWD 162


>emb|CBH19894.1| cell division control 20 [Solanum lycopersicum var. cerasiforme]
          Length = 448

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/95 (72%), Positives = 80/95 (84%)
 Frame = -3

Query: 286 KEAYRKQLAEVFNMNRPRILAFKNKPPPAAESLFPEPASTFHQAKPVKPRRSIPQTSERT 107
           KEAY KQLAE+FNMNR RILAFKNKPP +AE +   P+S   Q K VK RR IPQ+SERT
Sbjct: 64  KEAYSKQLAEIFNMNRTRILAFKNKPPHSAERVSESPSS-IQQPKTVKKRRYIPQSSERT 122

Query: 106 LDAPEILDDYYLNLLDWSSSNILAIALGNTVYLWD 2
           LDAP+ILDD+YLNLLDW S+N++AIALGN+VYLWD
Sbjct: 123 LDAPDILDDFYLNLLDWGSNNVIAIALGNSVYLWD 157


>ref|XP_002319120.1| predicted protein [Populus trichocarpa] gi|222857496|gb|EEE95043.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/95 (70%), Positives = 77/95 (81%)
 Frame = -3

Query: 286 KEAYRKQLAEVFNMNRPRILAFKNKPPPAAESLFPEPASTFHQAKPVKPRRSIPQTSERT 107
           +EAYRKQLAE  NMNR RILAFKNKPP   E +  + +   HQ K  KPRR IPQTSERT
Sbjct: 70  REAYRKQLAESLNMNRTRILAFKNKPPAPVELMPQDHSHHHHQPKTAKPRRHIPQTSERT 129

Query: 106 LDAPEILDDYYLNLLDWSSSNILAIALGNTVYLWD 2
           LDAP+++DD+YLNLLDW SSN+LAIALG+TVYLWD
Sbjct: 130 LDAPDLVDDFYLNLLDWGSSNVLAIALGSTVYLWD 164


>ref|XP_002520003.1| cell division cycle, putative [Ricinus communis]
           gi|223540767|gb|EEF42327.1| cell division cycle,
           putative [Ricinus communis]
          Length = 447

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/96 (70%), Positives = 79/96 (82%), Gaps = 1/96 (1%)
 Frame = -3

Query: 286 KEAYRKQLAEVFNMNRPRILAFKNKPPPAAESLFPEPASTFH-QAKPVKPRRSIPQTSER 110
           ++AYRKQLAE  NMNR RILAFKNKPP   E +  E  S+ H QAKP K +R IPQTSER
Sbjct: 62  RDAYRKQLAETLNMNRTRILAFKNKPPVPVELIPQEHLSSTHLQAKPTKSQRHIPQTSER 121

Query: 109 TLDAPEILDDYYLNLLDWSSSNILAIALGNTVYLWD 2
           TLDAP+++DD+YLNLLDW SSN+LAIALGNT+YLWD
Sbjct: 122 TLDAPDLVDDFYLNLLDWGSSNVLAIALGNTIYLWD 157


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