BLASTX nr result

ID: Coptis21_contig00036839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036839
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631354.1| PREDICTED: 65-kDa microtubule-associated pro...   114   8e-24
ref|XP_002271779.2| PREDICTED: 65-kDa microtubule-associated pro...   114   8e-24
emb|CBI27647.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002299300.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002514924.1| PLE, putative [Ricinus communis] gi|22354597...   100   2e-19

>ref|XP_003631354.1| PREDICTED: 65-kDa microtubule-associated protein 8-like isoform 2
           [Vitis vinifera]
          Length = 582

 Score =  114 bits (285), Expect = 8e-24
 Identities = 60/96 (62%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   QENLLVSRPTTSNRRLSSKSINGGFGNATPLNRRLSMGIQHLGSNNINSPSQAMSLIKES 182
           QENL  SRP+TS+RRLS+ S+NGGF  AT LNRRLS+GIQ LGSN+INSP+Q +S IKE 
Sbjct: 488 QENLFGSRPSTSSRRLSNMSLNGGFSTATALNRRLSLGIQQLGSNSINSPTQGLSFIKEG 547

Query: 183 KKSEGRTVWSRQGRASYRIEDTASVVSATYSGPLSP 290
           KK++G+ +  R    S+  E+TASVV  T+SGPLSP
Sbjct: 548 KKAQGQKMSVRLSLVSHPREETASVV-PTFSGPLSP 582


>ref|XP_002271779.2| PREDICTED: 65-kDa microtubule-associated protein 8-like isoform 1
           [Vitis vinifera]
          Length = 595

 Score =  114 bits (285), Expect = 8e-24
 Identities = 60/96 (62%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   QENLLVSRPTTSNRRLSSKSINGGFGNATPLNRRLSMGIQHLGSNNINSPSQAMSLIKES 182
           QENL  SRP+TS+RRLS+ S+NGGF  AT LNRRLS+GIQ LGSN+INSP+Q +S IKE 
Sbjct: 501 QENLFGSRPSTSSRRLSNMSLNGGFSTATALNRRLSLGIQQLGSNSINSPTQGLSFIKEG 560

Query: 183 KKSEGRTVWSRQGRASYRIEDTASVVSATYSGPLSP 290
           KK++G+ +  R    S+  E+TASVV  T+SGPLSP
Sbjct: 561 KKAQGQKMSVRLSLVSHPREETASVV-PTFSGPLSP 595


>emb|CBI27647.3| unnamed protein product [Vitis vinifera]
          Length = 567

 Score =  114 bits (285), Expect = 8e-24
 Identities = 60/96 (62%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   QENLLVSRPTTSNRRLSSKSINGGFGNATPLNRRLSMGIQHLGSNNINSPSQAMSLIKES 182
           QENL  SRP+TS+RRLS+ S+NGGF  AT LNRRLS+GIQ LGSN+INSP+Q +S IKE 
Sbjct: 473 QENLFGSRPSTSSRRLSNMSLNGGFSTATALNRRLSLGIQQLGSNSINSPTQGLSFIKEG 532

Query: 183 KKSEGRTVWSRQGRASYRIEDTASVVSATYSGPLSP 290
           KK++G+ +  R    S+  E+TASVV  T+SGPLSP
Sbjct: 533 KKAQGQKMSVRLSLVSHPREETASVV-PTFSGPLSP 567


>ref|XP_002299300.1| predicted protein [Populus trichocarpa] gi|222846558|gb|EEE84105.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/98 (57%), Positives = 78/98 (79%), Gaps = 2/98 (2%)
 Frame = +3

Query: 3   QENLL--VSRPTTSNRRLSSKSINGGFGNATPLNRRLSMGIQHLGSNNINSPSQAMSLIK 176
           QENL+   SRP+TS+RRLS+KS+NGGF NATPLNRRLS+G + LG+N+INS +Q +S IK
Sbjct: 485 QENLIGSSSRPSTSSRRLSNKSLNGGFSNATPLNRRLSLGPRQLGTNSINSANQGISYIK 544

Query: 177 ESKKSEGRTVWSRQGRASYRIEDTASVVSATYSGPLSP 290
           E +K +G+ ++ R   +S+  ++ ASVVS ++SGPLSP
Sbjct: 545 EGRKIQGQKMFLRPDLSSHLRDEAASVVS-SFSGPLSP 581


>ref|XP_002514924.1| PLE, putative [Ricinus communis] gi|223545975|gb|EEF47478.1| PLE,
           putative [Ricinus communis]
          Length = 583

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/97 (54%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   QENLLVSRPTTSNRRLSSKSINGGFGNATPLNRRLSMGIQHLGSNNINSPSQAMSLIKES 182
           Q+N   SRP T +RR S++S+NGG  NA PLNRR+S+ IQ LG+N+INS  Q +S IKE 
Sbjct: 488 QDNAFGSRPATGSRRPSNRSLNGGLSNAAPLNRRVSLSIQQLGTNSINSAIQGISFIKEG 547

Query: 183 KKSEGRTVWS-RQGRASYRIEDTASVVSATYSGPLSP 290
           KK +G+ +++   G ASY  ++TASVVS T+SGP+SP
Sbjct: 548 KKLQGQKMFAGPPGLASYLRDETASVVS-TFSGPISP 583


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