BLASTX nr result

ID: Coptis21_contig00036779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036779
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541270.1| PREDICTED: uncharacterized protein LOC100798...    53   6e-12
ref|XP_002271198.2| PREDICTED: uncharacterized protein LOC100251...    54   9e-11
ref|XP_003601409.1| hypothetical protein MTR_3g080400 [Medicago ...    52   1e-10
ref|XP_003556836.1| PREDICTED: uncharacterized protein LOC100810...    49   1e-10
dbj|BAD16855.1| unknown protein [Oryza sativa Japonica Group] gi...    52   3e-10

>ref|XP_003541270.1| PREDICTED: uncharacterized protein LOC100798882 [Glycine max]
          Length = 681

 Score = 52.8 bits (125), Expect(2) = 6e-12
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = -3

Query: 232 SNQFFILVDNRPWLMDLDSRAAHLWQLMVTK 140
           S + +ILVDNRPWL DL SR  H+WQLMVTK
Sbjct: 36  SKKMYILVDNRPWLSDLGSRGVHIWQLMVTK 66



 Score = 42.4 bits (98), Expect(2) = 6e-12
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = -1

Query: 141 RLSPFANSKARQKGKDFRKKRVEKKDTS-KKYKRWFSLINAAALSKNK 1
           RLSPFA SK+R++ K+ ++   +   +  KK+ RWFSLI A  LS+ K
Sbjct: 68  RLSPFAYSKSRRERKEGKEVCPQSSSSKPKKFMRWFSLIEAVMLSRKK 115


>ref|XP_002271198.2| PREDICTED: uncharacterized protein LOC100251719 [Vitis vinifera]
           gi|297739209|emb|CBI28860.3| unnamed protein product
           [Vitis vinifera]
          Length = 683

 Score = 53.5 bits (127), Expect(2) = 9e-11
 Identities = 21/31 (67%), Positives = 28/31 (90%)
 Frame = -3

Query: 232 SNQFFILVDNRPWLMDLDSRAAHLWQLMVTK 140
           SN+F++LVDN+PWL ++ SR AH+WQLMVTK
Sbjct: 36  SNKFYVLVDNQPWLREIVSRPAHIWQLMVTK 66



 Score = 37.7 bits (86), Expect(2) = 9e-11
 Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 7/54 (12%)
 Frame = -1

Query: 141 RLSPFANSKARQKGKDFRKKRVE-------KKDTSKKYKRWFSLINAAALSKNK 1
           RLSPFAN KAR++ K+  K+ +E       K   S+ +++WF+LI+AA LS+ +
Sbjct: 68  RLSPFAN-KARRERKE-PKEMLELKGGSKSKNSKSENFQKWFTLIDAATLSRKR 119


>ref|XP_003601409.1| hypothetical protein MTR_3g080400 [Medicago truncatula]
           gi|355490457|gb|AES71660.1| hypothetical protein
           MTR_3g080400 [Medicago truncatula]
          Length = 701

 Score = 51.6 bits (122), Expect(2) = 1e-10
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = -3

Query: 232 SNQFFILVDNRPWLMDLDSRAAHLWQLMVTK 140
           S + +I VDNRPW+ DL SR AH+WQLMVTK
Sbjct: 36  SKKIYIFVDNRPWVRDLGSRGAHIWQLMVTK 66



 Score = 39.3 bits (90), Expect(2) = 1e-10
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = -1

Query: 141 RLSPFANSKARQKGKDFRKKRVEKKDTSKKYKRWFSLINA 22
           RLSPFA SK R++ K+  +K V  + ++ K+ RWFSLI A
Sbjct: 68  RLSPFAYSKNRRERKE--EKEVSSQPSTSKFLRWFSLIEA 105


>ref|XP_003556836.1| PREDICTED: uncharacterized protein LOC100810409 [Glycine max]
          Length = 886

 Score = 49.3 bits (116), Expect(2) = 1e-10
 Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = -3

Query: 232 SNQFFILVDNRPWLM-DLDSRAAHLWQLMVTK 140
           S + +ILVDNRPWL+ DL SR  H+WQLMVTK
Sbjct: 36  SKKMYILVDNRPWLLSDLGSRGVHIWQLMVTK 67



 Score = 41.2 bits (95), Expect(2) = 1e-10
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = -1

Query: 141 RLSPFANSKARQKGKDFRKKRVEKKDTS-KKYKRWFSLINAAALSKNK 1
           RLSPFA SKAR++ K+ ++   +   +  KK+ RWF LI A  LS+ K
Sbjct: 69  RLSPFAYSKARRERKEGKEICPQSSSSKPKKFMRWFPLIEAVMLSRKK 116


>dbj|BAD16855.1| unknown protein [Oryza sativa Japonica Group]
           gi|46805359|dbj|BAD16860.1| unknown protein [Oryza
           sativa Japonica Group]
          Length = 708

 Score = 52.0 bits (123), Expect(2) = 3e-10
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = -3

Query: 232 SNQFFILVDNRPWLMDLDSRAAHLWQLMVTK 140
           + +F IL+DNRPWL D D++ AHLWQLMVTK
Sbjct: 49  TKKFLILLDNRPWLQDQDTKPAHLWQLMVTK 79



 Score = 37.4 bits (85), Expect(2) = 3e-10
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
 Frame = -1

Query: 141 RLSPFANSKARQKGKDFRKKRVEKKDTS------KKYKRWFSLINAAALSK 7
           RLSPFAN++ R+KG +  KK V  KD            RW++LI+ A  +K
Sbjct: 81  RLSPFANTRTRRKGDETGKKLVFSKDPRHGSHLWNPSSRWYTLIDDAMRNK 131


Top