BLASTX nr result

ID: Coptis21_contig00036711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036711
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK01733.1| predicted protein [Hordeum vulgare subsp. vulgare]     47   1e-06
ref|NP_001174288.1| Os05g0239150 [Oryza sativa Japonica Group] g...    45   1e-06
gb|ABA18094.1| hAT-like transposase [Olimarabidopsis pumila]           49   3e-06
gb|EEC79762.1| hypothetical protein OsI_21153 [Oryza sativa Indi...    43   6e-06
gb|EEE64835.1| hypothetical protein OsJ_19692 [Oryza sativa Japo...    43   6e-06

>dbj|BAK01733.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 727

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 21/45 (46%), Positives = 32/45 (71%)
 Frame = -3

Query: 325 VLDPRYKLKLIEFCFSKIYPSSLVQKNIDIVTKALDDLFNDYVSK 191
           V+DPR+K+KL+EF +SKIY      K + +V  ++ DLF DYV++
Sbjct: 527 VMDPRFKMKLVEFSYSKIYGVE-AAKYVKVVNDSVHDLFKDYVAQ 570



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 10/26 (38%), Positives = 20/26 (76%)
 Frame = -1

Query: 108 YDSWVKQMTTVQPTKSDLDTYLEEGI 31
           +D ++ ++ T QP+KS+L+ YL+E +
Sbjct: 608 FDIYLSEIATTQPSKSELEQYLDESL 633


>ref|NP_001174288.1| Os05g0239150 [Oryza sativa Japonica Group]
           gi|222630809|gb|EEE62941.1| hypothetical protein
           OsJ_17746 [Oryza sativa Japonica Group]
           gi|255676156|dbj|BAH93016.1| Os05g0239150 [Oryza sativa
           Japonica Group]
          Length = 722

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 20/45 (44%), Positives = 33/45 (73%)
 Frame = -3

Query: 325 VLDPRYKLKLIEFCFSKIYPSSLVQKNIDIVTKALDDLFNDYVSK 191
           V+DPR+K+KL+EF +SKIY      K + +V  A+ +L+N+YV++
Sbjct: 520 VMDPRFKMKLVEFSYSKIYGVE-AAKYVKVVDDAVHELYNEYVAQ 563



 Score = 31.6 bits (70), Expect(2) = 1e-06
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -1

Query: 108 YDSWVKQMTTVQPTKSDLDTYLEEGI 31
           +D ++ ++ T QPTKS+L+ YL+E +
Sbjct: 601 FDMYLSEIATSQPTKSELEQYLDESL 626


>gb|ABA18094.1| hAT-like transposase [Olimarabidopsis pumila]
          Length = 672

 Score = 49.3 bits (116), Expect(2) = 3e-06
 Identities = 25/62 (40%), Positives = 39/62 (62%)
 Frame = -3

Query: 325 VLDPRYKLKLIEFCFSKIYPSSLVQKNIDIVTKALDDLFNDYVSKDGQTSTSSNVAGVNG 146
           V+DPR+K+KL+EF FSKI+      KNI  V  ++ +LF++Y++    T  +S     +G
Sbjct: 489 VMDPRFKMKLVEFSFSKIFGED-AGKNIKTVDDSIHELFSEYMALPEPTKPTSEGGKADG 547

Query: 145 LS 140
           LS
Sbjct: 548 LS 549



 Score = 26.6 bits (57), Expect(2) = 3e-06
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -1

Query: 108 YDSWVKQMTTVQPTKSDLDTYLEEGIY 28
           +D+++ + TT Q  KS+LD YLEE ++
Sbjct: 551 FDTYIME-TTGQNLKSELDQYLEETLF 576


>gb|EEC79762.1| hypothetical protein OsI_21153 [Oryza sativa Indica Group]
          Length = 722

 Score = 43.1 bits (100), Expect(2) = 6e-06
 Identities = 19/45 (42%), Positives = 32/45 (71%)
 Frame = -3

Query: 325 VLDPRYKLKLIEFCFSKIYPSSLVQKNIDIVTKALDDLFNDYVSK 191
           V+DPR+K+KL+EF +SKIY      K + +V  A+ +L+ +YV++
Sbjct: 520 VMDPRFKMKLVEFSYSKIYGVE-AAKYVKVVDDAVHELYKEYVAQ 563



 Score = 31.6 bits (70), Expect(2) = 6e-06
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -1

Query: 108 YDSWVKQMTTVQPTKSDLDTYLEEGI 31
           +D ++ ++ T QPTKS+L+ YL+E +
Sbjct: 601 FDMYLSEIATSQPTKSELEQYLDESL 626


>gb|EEE64835.1| hypothetical protein OsJ_19692 [Oryza sativa Japonica Group]
          Length = 722

 Score = 43.1 bits (100), Expect(2) = 6e-06
 Identities = 19/45 (42%), Positives = 32/45 (71%)
 Frame = -3

Query: 325 VLDPRYKLKLIEFCFSKIYPSSLVQKNIDIVTKALDDLFNDYVSK 191
           V+DPR+K+KL+EF +SKIY      K + +V  A+ +L+ +YV++
Sbjct: 520 VMDPRFKMKLVEFSYSKIYGVE-AAKYVKVVDDAVHELYKEYVAQ 563



 Score = 31.6 bits (70), Expect(2) = 6e-06
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -1

Query: 108 YDSWVKQMTTVQPTKSDLDTYLEEGI 31
           +D ++ ++ T QPTKS+L+ YL+E +
Sbjct: 601 FDMYLSEIATSQPTKSELEQYLDESL 626


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