BLASTX nr result

ID: Coptis21_contig00036521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036521
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280167.1| PREDICTED: origin recognition complex subuni...   163   1e-38
ref|NP_001105072.1| origin recognition complex subunit 4 [Zea ma...   160   1e-37
ref|XP_002456156.1| hypothetical protein SORBIDRAFT_03g031370 [S...   158   5e-37
gb|ACR36393.1| unknown [Zea mays]                                     157   7e-37
gb|EEE55188.1| hypothetical protein OsJ_03032 [Oryza sativa Japo...   157   7e-37

>ref|XP_002280167.1| PREDICTED: origin recognition complex subunit 4-like [Vitis
           vinifera]
          Length = 418

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/96 (82%), Positives = 91/96 (94%)
 Frame = +3

Query: 3   VRLDGVLHYDDNCSLKEIARQLCSENQLLFSKMASSDDNTQFLMAVLREYGLAHKTVVFV 182
           +RL+G+LH DDNC++KEIARQLC E+QLLFSKMAS DDN+QF++A+LRE GLAHKT++FV
Sbjct: 88  IRLNGLLHSDDNCAVKEIARQLCVEHQLLFSKMASFDDNSQFMIAMLRECGLAHKTIIFV 147

Query: 183 LDEFDLFTQGKQRLLYSLLDAMQSVTSQAVVIGVSC 290
           LDEFD FTQGKQRLLYSLLDAMQSVTSQAVVIGVSC
Sbjct: 148 LDEFDFFTQGKQRLLYSLLDAMQSVTSQAVVIGVSC 183


>ref|NP_001105072.1| origin recognition complex subunit 4 [Zea mays]
           gi|15866782|gb|AAL10455.1|AF417484_1 origin recognition
           complex subunit 4 [Zea mays]
          Length = 422

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/96 (79%), Positives = 91/96 (94%)
 Frame = +3

Query: 3   VRLDGVLHYDDNCSLKEIARQLCSENQLLFSKMASSDDNTQFLMAVLREYGLAHKTVVFV 182
           +RL+G+LH DDNC++KEIARQLCSE+QL FSKMASSDDNT+F++ +LRE GLAHKT++F+
Sbjct: 88  IRLNGMLHNDDNCAMKEIARQLCSEHQLSFSKMASSDDNTEFMIDMLRECGLAHKTILFI 147

Query: 183 LDEFDLFTQGKQRLLYSLLDAMQSVTSQAVVIGVSC 290
           L+EFDLF QGKQRLLYSLLDAMQS+TSQAVVIGVSC
Sbjct: 148 LEEFDLFAQGKQRLLYSLLDAMQSLTSQAVVIGVSC 183


>ref|XP_002456156.1| hypothetical protein SORBIDRAFT_03g031370 [Sorghum bicolor]
           gi|241928131|gb|EES01276.1| hypothetical protein
           SORBIDRAFT_03g031370 [Sorghum bicolor]
          Length = 422

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/96 (79%), Positives = 90/96 (93%)
 Frame = +3

Query: 3   VRLDGVLHYDDNCSLKEIARQLCSENQLLFSKMASSDDNTQFLMAVLREYGLAHKTVVFV 182
           +RL+G+LH DDNC++KEIARQLC E+QL FSKMASSDDNT+F++ +LRE GLAHKT++FV
Sbjct: 88  IRLNGMLHSDDNCAMKEIARQLCLEHQLSFSKMASSDDNTEFMIDMLRECGLAHKTILFV 147

Query: 183 LDEFDLFTQGKQRLLYSLLDAMQSVTSQAVVIGVSC 290
           L+EFDLF QGKQRLLYSLLDAMQS+TSQAVVIGVSC
Sbjct: 148 LEEFDLFAQGKQRLLYSLLDAMQSLTSQAVVIGVSC 183


>gb|ACR36393.1| unknown [Zea mays]
          Length = 422

 Score =  157 bits (398), Expect = 7e-37
 Identities = 75/96 (78%), Positives = 90/96 (93%)
 Frame = +3

Query: 3   VRLDGVLHYDDNCSLKEIARQLCSENQLLFSKMASSDDNTQFLMAVLREYGLAHKTVVFV 182
           +RL+G+LH DDNC++KEIARQLC E+QL FSKMASSDDNT+F++ +LRE GLAHKT++F+
Sbjct: 88  IRLNGMLHNDDNCAMKEIARQLCLEHQLSFSKMASSDDNTEFMIDMLRECGLAHKTILFI 147

Query: 183 LDEFDLFTQGKQRLLYSLLDAMQSVTSQAVVIGVSC 290
           L+EFDLF QGKQRLLYSLLDAMQS+TSQAVVIGVSC
Sbjct: 148 LEEFDLFAQGKQRLLYSLLDAMQSLTSQAVVIGVSC 183


>gb|EEE55188.1| hypothetical protein OsJ_03032 [Oryza sativa Japonica Group]
          Length = 425

 Score =  157 bits (398), Expect = 7e-37
 Identities = 76/96 (79%), Positives = 89/96 (92%)
 Frame = +3

Query: 3   VRLDGVLHYDDNCSLKEIARQLCSENQLLFSKMASSDDNTQFLMAVLREYGLAHKTVVFV 182
           +RL+G+LH DDNC+ KEIARQLC E+QL FSKMASSDDNT+F++ +LRE GLAHKT++FV
Sbjct: 91  IRLNGMLHSDDNCATKEIARQLCLEHQLSFSKMASSDDNTEFMIDMLRECGLAHKTIIFV 150

Query: 183 LDEFDLFTQGKQRLLYSLLDAMQSVTSQAVVIGVSC 290
           L+EFDLF QGKQRLLYSLLDAMQS+TSQAVVIGVSC
Sbjct: 151 LEEFDLFAQGKQRLLYSLLDAMQSLTSQAVVIGVSC 186


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