BLASTX nr result

ID: Coptis21_contig00036449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036449
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268601.2| PREDICTED: probable receptor protein kinase ...   386   e-105
emb|CBI39471.3| unnamed protein product [Vitis vinifera]              386   e-105
ref|XP_004140603.1| PREDICTED: probable receptor protein kinase ...   366   7e-99
ref|XP_004162388.1| PREDICTED: LOW QUALITY PROTEIN: probable rec...   363   4e-98
ref|XP_003537524.1| PREDICTED: probable receptor protein kinase ...   350   3e-94

>ref|XP_002268601.2| PREDICTED: probable receptor protein kinase TMK1-like [Vitis
            vinifera]
          Length = 926

 Score =  386 bits (992), Expect = e-105
 Identities = 192/362 (53%), Positives = 241/362 (66%)
 Frame = -3

Query: 1133 ADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIXXXXXXXXXXXXXXX 954
            AD+++ M + + A+SPTPS W +GTN C  WSGV+CD+  +V SI               
Sbjct: 27   ADEAAFMTKLAAALSPTPSGW-SGTNHCK-WSGVKCDAIGQVISINLASRSLSGMLPSDI 84

Query: 953  XXXXXXXXXXXXXNHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGXXXXXXXXXXX 774
                         N  SGPLPS +NL++LQ +FLD+NNF+SVP     G           
Sbjct: 85   NQLPQLQALSLQKNQLSGPLPSLSNLTSLQSVFLDNNNFSSVPPEFLLGLNSLQTFSISE 144

Query: 773  XXXXSPWVFPQYLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLPSS 594
                 PW  P++L +S  L +L ASN N+ G++P+IFG F +LQSVRLSYNNLTG LP S
Sbjct: 145  NPSLQPWRIPEHLSESTSLASLLASNANIFGTIPEIFGSFPNLQSVRLSYNNLTGPLPPS 204

Query: 593  FNGTGVQNLWLNNQMXXXXXXXXXXGTMTQLSQVWLQKNSFTGPIPDLSKCVNLFDLQLR 414
            F G+G+QNLWLNNQ           G M QLSQ WL  N+F+GPIPDLS    +FDLQLR
Sbjct: 205  FGGSGIQNLWLNNQKVGLSGRLDVLGAMVQLSQAWLHANAFSGPIPDLSNSSAIFDLQLR 264

Query: 413  DNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKPGPCDPQ 234
            DNQLTG++ PSL S  +L N+SL NN LQGPYP F   V VT+G+ NNFCNP+PGPCDPQ
Sbjct: 265  DNQLTGVLLPSLFSHPRLVNISLQNNKLQGPYPNFSKTVEVTLGSTNNFCNPQPGPCDPQ 324

Query: 233  VTTLLDIAGAMGYPMNLAQSWPGNDACHGWTFITCDSQGKNVTVINFSKQHFVGTISPAY 54
            VT LL++A A+GYPM LAQSW GNDAC GW+FI+CD+QGKNVT++NF KQ + G+ISPA+
Sbjct: 325  VTALLEVAKALGYPMILAQSWEGNDACKGWSFISCDAQGKNVTIVNFGKQEWSGSISPAF 384

Query: 53   GD 48
             +
Sbjct: 385  AN 386


>emb|CBI39471.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  386 bits (992), Expect = e-105
 Identities = 192/362 (53%), Positives = 241/362 (66%)
 Frame = -3

Query: 1133 ADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIXXXXXXXXXXXXXXX 954
            AD+++ M + + A+SPTPS W +GTN C  WSGV+CD+  +V SI               
Sbjct: 27   ADEAAFMTKLAAALSPTPSGW-SGTNHCK-WSGVKCDAIGQVISINLASRSLSGMLPSDI 84

Query: 953  XXXXXXXXXXXXXNHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGXXXXXXXXXXX 774
                         N  SGPLPS +NL++LQ +FLD+NNF+SVP     G           
Sbjct: 85   NQLPQLQALSLQKNQLSGPLPSLSNLTSLQSVFLDNNNFSSVPPEFLLGLNSLQTFSISE 144

Query: 773  XXXXSPWVFPQYLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLPSS 594
                 PW  P++L +S  L +L ASN N+ G++P+IFG F +LQSVRLSYNNLTG LP S
Sbjct: 145  NPSLQPWRIPEHLSESTSLASLLASNANIFGTIPEIFGSFPNLQSVRLSYNNLTGPLPPS 204

Query: 593  FNGTGVQNLWLNNQMXXXXXXXXXXGTMTQLSQVWLQKNSFTGPIPDLSKCVNLFDLQLR 414
            F G+G+QNLWLNNQ           G M QLSQ WL  N+F+GPIPDLS    +FDLQLR
Sbjct: 205  FGGSGIQNLWLNNQKVGLSGRLDVLGAMVQLSQAWLHANAFSGPIPDLSNSSAIFDLQLR 264

Query: 413  DNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKPGPCDPQ 234
            DNQLTG++ PSL S  +L N+SL NN LQGPYP F   V VT+G+ NNFCNP+PGPCDPQ
Sbjct: 265  DNQLTGVLLPSLFSHPRLVNISLQNNKLQGPYPNFSKTVEVTLGSTNNFCNPQPGPCDPQ 324

Query: 233  VTTLLDIAGAMGYPMNLAQSWPGNDACHGWTFITCDSQGKNVTVINFSKQHFVGTISPAY 54
            VT LL++A A+GYPM LAQSW GNDAC GW+FI+CD+QGKNVT++NF KQ + G+ISPA+
Sbjct: 325  VTALLEVAKALGYPMILAQSWEGNDACKGWSFISCDAQGKNVTIVNFGKQEWSGSISPAF 384

Query: 53   GD 48
             +
Sbjct: 385  AN 386


>ref|XP_004140603.1| PREDICTED: probable receptor protein kinase TMK1-like [Cucumis
            sativus]
          Length = 930

 Score =  366 bits (939), Expect = 7e-99
 Identities = 186/362 (51%), Positives = 230/362 (63%)
 Frame = -3

Query: 1133 ADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIXXXXXXXXXXXXXXX 954
            ADDS+++ + + A+SPTPS W + T  C+ W  +RCDSSSRVTSI               
Sbjct: 24   ADDSAVIQKLAAALSPTPSGWSSNTPFCS-WKEIRCDSSSRVTSINLASKSLSGVLPSDL 82

Query: 953  XXXXXXXXXXXXXNHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGXXXXXXXXXXX 774
                         N  +GP+PSFANLS LQ L+LD+NNF+SV    F G           
Sbjct: 83   NSLSQLTSLSLQRNSLTGPIPSFANLSFLQSLYLDNNNFSSVSPGAFQGLTSLQVLSLTQ 142

Query: 773  XXXXSPWVFPQYLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLPSS 594
                +PW  P  L Q+  LV+L A N N++GSLPD F  F SLQ +RLSYNNLTGVLP S
Sbjct: 143  NVNLAPWSIPTDLTQASSLVSLYAGNANIVGSLPDFFDSFASLQELRLSYNNLTGVLPKS 202

Query: 593  FNGTGVQNLWLNNQMXXXXXXXXXXGTMTQLSQVWLQKNSFTGPIPDLSKCVNLFDLQLR 414
              G+G+++LWLNNQ+           +MTQLSQVWLQKN FTG IPD SKC  LFDLQLR
Sbjct: 203  LGGSGIKSLWLNNQLNGLSGSIDLLSSMTQLSQVWLQKNQFTGQIPDFSKCEGLFDLQLR 262

Query: 413  DNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKPGPCDPQ 234
            DNQ TG+VPPSLMS+  L NVSLDNN LQGP P F + V  T  ++N FC   P PCD Q
Sbjct: 263  DNQFTGIVPPSLMSLSSLLNVSLDNNKLQGPLPVFDSRVQATFSSVNRFCKTTPDPCDAQ 322

Query: 233  VTTLLDIAGAMGYPMNLAQSWPGNDACHGWTFITCDSQGKNVTVINFSKQHFVGTISPAY 54
            V+ LL +AGA GYP++LA +W GN+ C  W+F+ C ++GK VT +NF KQH VG ISPA+
Sbjct: 323  VSVLLAVAGAFGYPISLADAWEGNNVCLDWSFVIC-TEGK-VTTVNFGKQHLVGVISPAF 380

Query: 53   GD 48
             +
Sbjct: 381  AN 382


>ref|XP_004162388.1| PREDICTED: LOW QUALITY PROTEIN: probable receptor protein kinase
            TMK1-like [Cucumis sativus]
          Length = 930

 Score =  363 bits (933), Expect = 4e-98
 Identities = 185/362 (51%), Positives = 229/362 (63%)
 Frame = -3

Query: 1133 ADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIXXXXXXXXXXXXXXX 954
            ADDS+++ + + A+SP PS W + T  C+ W  +RCDSSSRVTSI               
Sbjct: 24   ADDSAVIQKLAAALSPXPSGWSSNTPFCS-WKEIRCDSSSRVTSINLASKSLSGVLPSDL 82

Query: 953  XXXXXXXXXXXXXNHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGXXXXXXXXXXX 774
                         N  +GP+PSFANLS LQ L+LD+NNF+SV    F G           
Sbjct: 83   NSLSQLTSLSLQRNSLTGPIPSFANLSFLQSLYLDNNNFSSVSPGAFQGLTSLQVLSLTQ 142

Query: 773  XXXXSPWVFPQYLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLPSS 594
                +PW  P  L Q+  LV+L A N N++GSLPD F  F SLQ +RLSYNNLTGVLP S
Sbjct: 143  NVNLAPWSIPTDLTQASSLVSLYAGNANIVGSLPDFFDSFASLQELRLSYNNLTGVLPKS 202

Query: 593  FNGTGVQNLWLNNQMXXXXXXXXXXGTMTQLSQVWLQKNSFTGPIPDLSKCVNLFDLQLR 414
              G+G+++LWLNNQ+           +MTQLSQVWLQKN FTG IPD SKC  LFDLQLR
Sbjct: 203  LGGSGIKSLWLNNQLNGLSGSIDLLSSMTQLSQVWLQKNQFTGQIPDFSKCEGLFDLQLR 262

Query: 413  DNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKPGPCDPQ 234
            DNQ TG+VPPSLMS+  L NVSLDNN LQGP P F + V  T  ++N FC   P PCD Q
Sbjct: 263  DNQFTGIVPPSLMSLSSLLNVSLDNNKLQGPLPVFDSRVQATFSSVNRFCKTTPDPCDAQ 322

Query: 233  VTTLLDIAGAMGYPMNLAQSWPGNDACHGWTFITCDSQGKNVTVINFSKQHFVGTISPAY 54
            V+ LL +AGA GYP++LA +W GN+ C  W+F+ C ++GK VT +NF KQH VG ISPA+
Sbjct: 323  VSVLLAVAGAFGYPISLADAWEGNNVCLDWSFVIC-TEGK-VTTVNFGKQHLVGVISPAF 380

Query: 53   GD 48
             +
Sbjct: 381  AN 382


>ref|XP_003537524.1| PREDICTED: probable receptor protein kinase TMK1-like [Glycine max]
          Length = 927

 Score =  350 bits (899), Expect = 3e-94
 Identities = 183/363 (50%), Positives = 224/363 (61%), Gaps = 1/363 (0%)
 Frame = -3

Query: 1133 ADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIXXXXXXXXXXXXXXX 954
            ADD   M++ ++A+SPTPS W +G++ C  W+GV+C S+ RVTSI               
Sbjct: 30   ADDGEFMSKLAKALSPTPSGW-SGSSFC-AWNGVKC-SAHRVTSINIASQSLGGMLPPDL 86

Query: 953  XXXXXXXXXXXXXNHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGXXXXXXXXXXX 774
                         N  SG  PS ANLS L+ +FL SNNFTS+P  CF G           
Sbjct: 87   NSLSQLTSLSLQNNALSGAFPSLANLSMLESVFLSSNNFTSIPVGCFQGLPSLQTLSMTD 146

Query: 773  XXXXSPWVFPQYLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLPSS 594
                +PW  P  L  S  LV L   N N++G+LPD+F KF+SL  +RLSYNNLTGVLP S
Sbjct: 147  SINLAPWTIPAELTDSINLVKLELGNANLIGTLPDVFDKFVSLVELRLSYNNLTGVLPKS 206

Query: 593  FNGTGVQNLWLNNQMXXXXXXXXXXG-TMTQLSQVWLQKNSFTGPIPDLSKCVNLFDLQL 417
            F G+ +QN+WLNNQ             +MT LSQVWLQKN FTGPIPDLS C  LFDLQL
Sbjct: 207  FAGSAIQNMWLNNQNGFGFSGTIEVLASMTHLSQVWLQKNQFTGPIPDLSNCTTLFDLQL 266

Query: 416  RDNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKPGPCDP 237
            RDNQLTG+VPPSLMS+  L+NV+L NN LQGP P FG GV  T+  IN+FC    GPCD 
Sbjct: 267  RDNQLTGVVPPSLMSLSGLQNVTLANNALQGPVPSFGKGVKFTLDGINSFCLKDVGPCDS 326

Query: 236  QVTTLLDIAGAMGYPMNLAQSWPGNDACHGWTFITCDSQGKNVTVINFSKQHFVGTISPA 57
            +VTTLLDIA   GYP  LA+SW GND C  W+F+ C   G  +  +N +KQ+  GTISPA
Sbjct: 327  RVTTLLDIAAGFGYPFQLARSWTGNDPCDDWSFVVC--AGGKIITVNLAKQNLTGTISPA 384

Query: 56   YGD 48
            + +
Sbjct: 385  FAN 387


Top