BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036126
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]   145   4e-33
ref|XP_002326371.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32
ref|XP_002866679.1| pentatricopeptide repeat-containing protein ...   137   9e-31

>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
           protein product [Vitis vinifera]
          Length = 890

 Score =  145 bits (365), Expect = 4e-33
 Identities = 74/124 (59%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
 Frame = +3

Query: 9   VFELMTRK----NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALC 176
           VF +M +K    N+V+YT LIHGLCE  RI+EA  L+  M +D C PTVRTYTVLI AL 
Sbjct: 251 VFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALS 310

Query: 177 RAGRRLEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVV 356
            +GR++EA +L+  MK +G EPN +TY+VLID LCKE K+D+AR ML+E+  KGLIP VV
Sbjct: 311 GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370

Query: 357 TYNA 368
           TYNA
Sbjct: 371 TYNA 374



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/114 (37%), Positives = 61/114 (53%)
 Frame = +3

Query: 27  RKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFD 206
           + N+V YT LI G C+  +I  A++L  +M +D C P   TY VLI  LC+  +  EA  
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565

Query: 207 LYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           L   M   G +P   TY++LI  + K+   D A  + N ++  G  PDV TY A
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/108 (37%), Positives = 64/108 (59%)
 Frame = +3

Query: 45  YTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRGMK 224
           YT LI GLC++ ++ EA  +  +M +    P+V TY  LI   C+ G   +AF++   M+
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 225 GRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
                PN  TY+ LI  LCK++K+  A  +LN++L + L P ++TYN+
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/109 (35%), Positives = 58/109 (53%)
 Frame = +3

Query: 39  VAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRG 218
           + Y +LIHG C+   +  A+ L   M ++   P   TY+V I  LC+ GR  EA  L+  
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 219 MKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYN 365
           +K +G + N   Y+ LID  CK  K+D A  +L  +L    +P+  TYN
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/112 (34%), Positives = 60/112 (53%)
 Frame = +3

Query: 33  NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLY 212
           N   Y  LI GLC+  ++ +A AL  KM +    P++ TY  LI   C+      A+ L 
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 213 RGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
             M   G  P+ +TYSV ID+LCKE ++++A  + + +  KG+  + V Y A
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/109 (35%), Positives = 55/109 (50%)
 Frame = +3

Query: 39  VAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRG 218
           V Y  LI G C++  I +AF +   M  + C P  RTY  LI  LC+  +  +A  L   
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 219 MKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYN 365
           M  R   P+  TY+ LI   CK   L+ A  +L+ +   GL+PD  TY+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/110 (30%), Positives = 62/110 (56%)
 Frame = +3

Query: 33  NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLY 212
           N   Y  LI GLC+++++ EA +L  KM     +PTV TYT+LI  + + G    A  ++
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 213 RGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTY 362
             M   G +P+  TY+  + +   +  L++   ++ ++  +G++PD+VTY
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652


>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  145 bits (365), Expect = 4e-33
 Identities = 74/124 (59%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
 Frame = +3

Query: 9   VFELMTRK----NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALC 176
           VF +M +K    N+V+YT LIHGLCE  RI+EA  L+  M +D C PTVRTYTVLI AL 
Sbjct: 251 VFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALS 310

Query: 177 RAGRRLEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVV 356
            +GR++EA +L+  MK +G EPN +TY+VLID LCKE K+D+AR ML+E+  KGLIP VV
Sbjct: 311 GSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370

Query: 357 TYNA 368
           TYNA
Sbjct: 371 TYNA 374



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/114 (37%), Positives = 61/114 (53%)
 Frame = +3

Query: 27  RKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFD 206
           + N+V YT LI G C+  +I  A++L  +M +D C P   TY VLI  LC+  +  EA  
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565

Query: 207 LYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           L   M   G +P   TY++LI  + K+   D A  + N ++  G  PDV TY A
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/108 (37%), Positives = 64/108 (59%)
 Frame = +3

Query: 45  YTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRGMK 224
           YT LI GLC++ ++ EA  +  +M +    P+V TY  LI   C+ G   +AF++   M+
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396

Query: 225 GRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
                PN  TY+ LI  LCK++K+  A  +LN++L + L P ++TYN+
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/109 (35%), Positives = 58/109 (53%)
 Frame = +3

Query: 39  VAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRG 218
           + Y +LIHG C+   +  A+ L   M ++   P   TY+V I  LC+ GR  EA  L+  
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 219 MKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYN 365
           +K +G + N   Y+ LID  CK  K+D A  +L  +L    +P+  TYN
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/112 (34%), Positives = 60/112 (53%)
 Frame = +3

Query: 33  NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLY 212
           N   Y  LI GLC+  ++ +A AL  KM +    P++ TY  LI   C+      A+ L 
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 213 RGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
             M   G  P+ +TYSV ID+LCKE ++++A  + + +  KG+  + V Y A
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/109 (35%), Positives = 55/109 (50%)
 Frame = +3

Query: 39  VAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRG 218
           V Y  LI G C++  I +AF +   M  + C P  RTY  LI  LC+  +  +A  L   
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 219 MKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYN 365
           M  R   P+  TY+ LI   CK   L+ A  +L+ +   GL+PD  TY+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYS 478



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/110 (30%), Positives = 62/110 (56%)
 Frame = +3

Query: 33  NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLY 212
           N   Y  LI GLC+++++ EA +L  KM     +PTV TYT+LI  + + G    A  ++
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 213 RGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTY 362
             M   G +P+  TY+  + +   +  L++   ++ ++  +G++PD+VTY
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652


>ref|XP_002326371.1| predicted protein [Populus trichocarpa] gi|222833564|gb|EEE72041.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/125 (54%), Positives = 93/125 (74%), Gaps = 4/125 (3%)
 Frame = +3

Query: 6   RVFELMT----RKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILAL 173
           +VF +M     R+N+V+YTT+IHGLCE  RI E  +L+ KM +D C PTVRTYTV+I AL
Sbjct: 270 KVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL 329

Query: 174 CRAGRRLEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDV 353
               R LE  DL+  M+ R  EPN +TY+V++D++CKE+KLD++R +LNE++ KGL+P V
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389

Query: 354 VTYNA 368
           VTYNA
Sbjct: 390 VTYNA 394



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/114 (35%), Positives = 61/114 (53%)
 Frame = +3

Query: 27  RKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFD 206
           + N+V YT LI G C+  +I EA +L  +M  + C P   TY  LI  +C+ G+  E   
Sbjct: 526 KANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLS 585

Query: 207 LYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           +   M   G +P   TY++LI+ + +E   D A  + N+++  G  PDV TY A
Sbjct: 586 MVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTA 639



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/114 (35%), Positives = 62/114 (54%)
 Frame = +3

Query: 27  RKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFD 206
           R N+  Y  LI G  + + + +A  L  KM +    P++ TY  LI   C+AG    A+ 
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480

Query: 207 LYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           L   +K  G  P+ +TYSV ID+LCK K++++A  + N +  KG+  + V Y A
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/110 (30%), Positives = 60/110 (54%)
 Frame = +3

Query: 33  NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLY 212
           N   Y +LI+G+C++ ++ E  ++   M     +PTV TYT+LI  + R G    A  ++
Sbjct: 563 NSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVF 622

Query: 213 RGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTY 362
             M   G +P+ YTY+  I + C    + +A  M+  ++  G++PD +TY
Sbjct: 623 NQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTY 672



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/110 (33%), Positives = 59/110 (53%)
 Frame = +3

Query: 39  VAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRG 218
           V Y +LIH  C+      A+ L   + ++   P   TY+V I  LC++ R  EA DL+  
Sbjct: 460 VTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNS 519

Query: 219 MKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           +K +G + N   Y+ LID  CK  K+D+A  +L  +  +  +P+  TYN+
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/106 (33%), Positives = 52/106 (49%)
 Frame = +3

Query: 45  YTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRGMK 224
           Y+  I  LC+ +R+ EA  L+  + +   +     YT LI   C+AG+  EA  L   M 
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMH 556

Query: 225 GRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTY 362
                PN  TY+ LI  +CKE K+ +   M+  +   G+ P V TY
Sbjct: 557 SEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATY 602


>ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/120 (56%), Positives = 88/120 (73%)
 Frame = +3

Query: 9   VFELMTRKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGR 188
           VF +M R+N V+YT LIHGLCE  ++ EA   + +M +D C PTVRTYTVL+ ALC +GR
Sbjct: 246 VFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGR 305

Query: 189 RLEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
            LEA  L+  M+ RG EPN YTY+VLID LCKE ++D+A  MLNE++ KG+ P VV +NA
Sbjct: 306 ELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNA 365



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/118 (33%), Positives = 64/118 (54%)
 Frame = +3

Query: 15  ELMTRKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRL 194
           E   + N+ AYT LI G C+  +I  A +L+ +M  + C P   T+ V+I  L + G+  
Sbjct: 493 EKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQ 552

Query: 195 EAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           +A  L   M     +P  +TY++L++ + KE   D A  +LN ++  G  P+VVTY A
Sbjct: 553 DAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTA 610



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/109 (33%), Positives = 57/109 (52%)
 Frame = +3

Query: 39  VAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRG 218
           V Y TLIHGLCE   +  A  L+  M  D   P   T+   ++ LCR GR  EA  +   
Sbjct: 431 VTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILES 490

Query: 219 MKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYN 365
           +K +  + N + Y+ LID  CK  K++ A  +   +L +  +P+ +T+N
Sbjct: 491 LKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFN 539



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
 Frame = +3

Query: 6   RVFELMTRK----NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILAL 173
           R+F LM R     +   +   +  LC   R+ EA  +   + + + +     YT LI   
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 174 CRAGRRLEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDV 353
           C+AG+   A  L++ M      PN  T++V+ID L KE K+ DA +++ ++    + P +
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570

Query: 354 VTYN 365
            TYN
Sbjct: 571 HTYN 574



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/121 (24%), Positives = 60/121 (49%)
 Frame = +3

Query: 3   KRVFELMTRKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRA 182
           KR+       N + +  +I GL ++ ++ +A  L   M     +PT+ TY +L+  + + 
Sbjct: 524 KRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKE 583

Query: 183 GRRLEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTY 362
                A ++   +   G +PN  TY+  I + C + +L++A  M+ +I  +G++ D   Y
Sbjct: 584 YDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIY 643

Query: 363 N 365
           N
Sbjct: 644 N 644



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 34/110 (30%), Positives = 47/110 (42%)
 Frame = +3

Query: 39  VAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRG 218
           V +  LI   C+   + +A  + G M      P VRTY  LI   CR      A  L   
Sbjct: 361 VPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNK 420

Query: 219 MKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           M      P+  TY+ LI  LC+   +D A  +   ++  G  PD  T+NA
Sbjct: 421 MVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNA 470


>ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312514|gb|EFH42938.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 915

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/114 (58%), Positives = 88/114 (77%)
 Frame = +3

Query: 27  RKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFD 206
           R+N+VAYT LIHGLC + RI EA  L+ KM DD C PTVRTYTVLI ALC + R+ EA +
Sbjct: 285 RRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALN 344

Query: 207 LYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           L + M+ +G +PN +TY+VLIDSLC + KL+ AR +L ++L KGL+P+V+TYNA
Sbjct: 345 LVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNA 398



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/110 (36%), Positives = 61/110 (55%)
 Frame = +3

Query: 39  VAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRG 218
           V Y +LI G C       A+ L   M D    P   TYT +I +LC++ R  EA DL+  
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 219 MKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           ++ +   PN   Y+ LID  CK  K+++A +ML ++L K  +P+ +T+NA
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/112 (35%), Positives = 64/112 (57%)
 Frame = +3

Query: 33  NDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLY 212
           N + +  LIHGLC D ++ EA  L  KM     +PTV T T+LI  L + G    A+  +
Sbjct: 566 NSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRF 625

Query: 213 RGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTYNA 368
           + M   G +P+ +TY+  I + C+E +L DA  M+ ++   G+ PD+ TY++
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSS 677



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/122 (36%), Positives = 65/122 (53%)
 Frame = +3

Query: 3   KRVFELMTRKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRA 182
           K + E   + N   YT LI  LC   ++ +A  L G+M +    P V TY  LI   C+ 
Sbjct: 347 KEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 183 GRRLEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTY 362
           G   +A D+   M+ R   PN  TY+ LI   CK + +  A  +LN++L + ++PDVVTY
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTY 465

Query: 363 NA 368
           N+
Sbjct: 466 NS 467



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
 Frame = +3

Query: 9   VFELMT----RKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALC 176
           V ELM     R N   Y  LI G C+   + +A  +  KM +    P V TY  LI   C
Sbjct: 415 VVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473

Query: 177 RAGRRLEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVV 356
           R+G    A+ L   M  RG  P+ +TY+ +IDSLCK K++++A  + + +  K +IP+VV
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVV 533

Query: 357 TYNA 368
            Y A
Sbjct: 534 MYTA 537



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/105 (33%), Positives = 55/105 (52%)
 Frame = +3

Query: 45  YTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRGMK 224
           YT++I  LC+ +R+ EA  L+  +      P V  YT LI   C+AG+  EA  +   M 
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559

Query: 225 GRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVT 359
            +   PN  T++ LI  LC + KL +A ++  +++   L P V T
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVST 604



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/117 (29%), Positives = 55/117 (47%)
 Frame = +3

Query: 12  FELMTRKNDVAYTTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRR 191
           FEL  +     Y TL++ L     + E   +Y +M +D   P + TY  ++   C+ G  
Sbjct: 175 FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNV 234

Query: 192 LEAFDLYRGMKGRGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTY 362
            EA      +   G +P+F+TY+ LI   C+ K LD A  +  E+  KG   + V Y
Sbjct: 235 EEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAY 291



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/105 (31%), Positives = 48/105 (45%)
 Frame = +3

Query: 48  TTLIHGLCEDERISEAFALYGKMGDDYCRPTVRTYTVLILALCRAGRRLEAFDLYRGMKG 227
           T LIH L +D     A+  + +M     +P   TYT  I   CR GR  +A D+   MK 
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665

Query: 228 RGREPNFYTYSVLIDSLCKEKKLDDARMMLNEILGKGLIPDVVTY 362
            G  P+ +TYS LI       + + A ++L  +   G  P   T+
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTF 710