BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035964
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]   114   1e-23
ref|XP_002515341.1| pentatricopeptide repeat-containing protein,...   101   6e-20
ref|XP_002330763.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002330760.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18

>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g10690-like [Vitis vinifera]
          Length = 609

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/83 (71%), Positives = 68/83 (81%)
 Frame = -1

Query: 254 LVHREDCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIGYI 75
           L+HREDC++L   +S +MR PPPCVT +TSIGRV DL+LEKRYKM+VVVK +NLY   Y 
Sbjct: 508 LLHREDCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKRYKMVVVVKYSNLYGSSYS 567

Query: 74  SSLRAVGVFTPEQLFKLATFASE 6
           SSLRAVGVFT EQLFKLA  ASE
Sbjct: 568 SSLRAVGVFTSEQLFKLA-IASE 589


>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
          Length = 1120

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/83 (69%), Positives = 67/83 (80%)
 Frame = -1

Query: 254 LVHREDCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIGYI 75
           L+H EDC++L   +S +MR PPPCVT +TSIGRV DL+LEKRYKM+VVVK +NLY   Y 
Sbjct: 482 LLHHEDCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKRYKMVVVVKYSNLYGSSYS 541

Query: 74  SSLRAVGVFTPEQLFKLATFASE 6
           SSLRAVGVFT EQLFKLA  ASE
Sbjct: 542 SSLRAVGVFTSEQLFKLA-MASE 563


>ref|XP_002515341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545285|gb|EEF46790.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 600

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/83 (60%), Positives = 65/83 (78%)
 Frame = -1

Query: 254 LVHREDCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIGYI 75
           L+HREDC +L  +L+ +MR PPPCVT  TSIG V+DL+L+K+Y+M+VV+K +NL  I Y 
Sbjct: 501 LLHREDCTELNATLATMMRSPPPCVTTMTSIGHVVDLILDKKYRMVVVIKYSNLDSITY- 559

Query: 74  SSLRAVGVFTPEQLFKLATFASE 6
           SS RAVGVFT E+L+KLA   SE
Sbjct: 560 SSSRAVGVFTAEKLYKLAKPVSE 582


>ref|XP_002330763.1| predicted protein [Populus trichocarpa] gi|222872565|gb|EEF09696.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = -1

Query: 254 LVHREDCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIGYI 75
           L+HREDC +L   L  +MR PPPCVT +TSIG V+DL+LEK Y+M+VVVK +NL      
Sbjct: 142 LLHREDCTELNAPLMTMMRSPPPCVTTTTSIGHVVDLILEKMYRMVVVVKYSNLNSSTNS 201

Query: 74  SSLRAVGVFTPEQLFKL 24
           S  + VGVFT EQLFKL
Sbjct: 202 SGSKTVGVFTAEQLFKL 218


>ref|XP_002330760.1| predicted protein [Populus trichocarpa] gi|222872562|gb|EEF09693.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = -1

Query: 254 LVHREDCKQLKTSLSKIMRGPPPCVTASTSIGRVIDLLLEKRYKMIVVVKPNNLYEIGYI 75
           L+HREDC +L   L  +MR PPPCVT +TSIG V+DL+LEK Y+M+VVVK +NL      
Sbjct: 507 LLHREDCTELNAPLMTMMRSPPPCVTTTTSIGHVVDLILEKMYRMVVVVKYSNLNSSTNS 566

Query: 74  SSLRAVGVFTPEQLFKL 24
           S  + VGVFT EQLFKL
Sbjct: 567 SGSKTVGVFTTEQLFKL 583