BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035949
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidop...    87   1e-15
ref|NP_177089.2| pentatricopeptide repeat-containing protein [Ar...    87   1e-15
ref|XP_002888712.1| hypothetical protein ARALYDRAFT_339164 [Arab...    85   5e-15
emb|CBI27289.3| unnamed protein product [Vitis vinifera]               81   1e-13

>ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
 Frame = -3

Query: 248 LKRQQFCTTPEIPTLYSFLQPSIFALKRNQPSQNPPKTL--HPIPKTLTPDQKTSFETTL 75
           L+R+ F TTPEIP LYSFLQP+IFALK+  PS   P T      PK LT D  T+ E+TL
Sbjct: 9   LRRRSFSTTPEIPNLYSFLQPTIFALKKTPPSTTNPATTTNRQTPKILTQDHITNLESTL 68

Query: 74  HNSIQTNNTDEAWKCFKILTSTS 6
           H S+ TNNT+EAW  FK LTS S
Sbjct: 69  HKSLITNNTNEAWASFKSLTSNS 91


>gb|AAG52501.1|AC018364_19 unknown protein; 45065-49536 [Arabidopsis thaliana]
          Length = 860

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
 Frame = -3

Query: 275 RTTLSSILYLKRQQFCTTPEIPTLYSFLQPSIFALK--RNQPSQNPPKTLHPIPKTLTPD 102
           R TL+SI   +R    ++PE P+LYSFL+PS+F+ K     PS +PP+     PKTLTPD
Sbjct: 205 RKTLNSIS--RRHFSSSSPESPSLYSFLKPSLFSHKPITLSPSLSPPQN----PKTLTPD 258

Query: 101 QKTSFETTLHNSIQTNNTDEAWKCFKILTSTSN 3
           QK+SFE+TLH+S+  + TDEAWK F+ LT+ S+
Sbjct: 259 QKSSFESTLHDSLNAHYTDEAWKAFRSLTAASS 291


>ref|NP_177089.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806277|sp|P0C7R4.1|PP110_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g69290 gi|332196785|gb|AEE34906.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
 Frame = -3

Query: 275 RTTLSSILYLKRQQFCTTPEIPTLYSFLQPSIFALK--RNQPSQNPPKTLHPIPKTLTPD 102
           R TL+SI   +R    ++PE P+LYSFL+PS+F+ K     PS +PP+     PKTLTPD
Sbjct: 3   RKTLNSIS--RRHFSSSSPESPSLYSFLKPSLFSHKPITLSPSLSPPQN----PKTLTPD 56

Query: 101 QKTSFETTLHNSIQTNNTDEAWKCFKILTSTSN 3
           QK+SFE+TLH+S+  + TDEAWK F+ LT+ S+
Sbjct: 57  QKSSFESTLHDSLNAHYTDEAWKAFRSLTAASS 89


>ref|XP_002888712.1| hypothetical protein ARALYDRAFT_339164 [Arabidopsis lyrata subsp.
           lyrata] gi|297334553|gb|EFH64971.1| hypothetical protein
           ARALYDRAFT_339164 [Arabidopsis lyrata subsp. lyrata]
          Length = 1042

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
 Frame = -3

Query: 287 MWRRRTTLSSILYLKRQQFCTTPEIPTLYSFLQPSIFALK--RNQPSQNPPKTLHPIPKT 114
           M+R+  T+ S    +R    ++PE P+LYSFL+PS+F+ K     PS +PP+ L    KT
Sbjct: 1   MFRKTLTIIS----RRHFSSSSPESPSLYSFLKPSLFSNKPITLTPSLSPPQNL----KT 52

Query: 113 LTPDQKTSFETTLHNSIQTNNTDEAWKCFKILTSTSN 3
           LT +QK+SFE+TLH+S+ T+NTDEAWK F+ LT+ S+
Sbjct: 53  LTQEQKSSFESTLHDSLTTHNTDEAWKAFRSLTAASS 89


>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
 Frame = -3

Query: 287 MWRRRTTLSSILYLKRQQFCTTPE--IPTLYSFLQPSIFALKRNQPSQNPPKTLHPI-PK 117
           MWRR     ++ +  +++F +T E   PTLYSFLQPS+F+LK   P  + P++ HP  PK
Sbjct: 1   MWRRAV---AVRFAPQRRFSSTSESEFPTLYSFLQPSLFSLK---PIPSAPRSPHPTSPK 54

Query: 116 TLTPDQKTSFETTLHNSIQTNNTDEAWKCFKILTSTS 6
            L        E+ LH S+ TNNTDEAWK FK LT+ S
Sbjct: 55  PLQSPAPEDLESALHTSLSTNNTDEAWKSFKALTTNS 91