BLASTX nr result

ID: Coptis21_contig00035946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035946
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317597.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002522945.1| conserved hypothetical protein [Ricinus comm...    93   2e-17
ref|XP_002278240.2| PREDICTED: uncharacterized protein LOC100255...    88   8e-16
emb|CBI26632.3| unnamed protein product [Vitis vinifera]               88   8e-16
emb|CAN63914.1| hypothetical protein VITISV_004851 [Vitis vinifera]    88   8e-16

>ref|XP_002317597.1| predicted protein [Populus trichocarpa] gi|222860662|gb|EEE98209.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
 Frame = +2

Query: 17  NPSNPLPPAYRYFYHDDPKIQRLVRNRLPYFFPLSVDDSRGNP-NADAAVNYMSQFGQN- 190
           N ++PLPPA+ YF+H+D +IQRLV +RLPYFFPL + +++GN    ++A++YMSQF +  
Sbjct: 312 NLADPLPPAHHYFFHEDLRIQRLVHSRLPYFFPLGIVNNKGNQLITESAIDYMSQFNREA 371

Query: 191 EXXXXXXXXXXXXXXXXXXNNFNDSHAEEVSVVSGKRVSRQKSARIPKDAGKRRVSANCS 370
                              N    S+A EVS+ S   V  + S  IPKDAGKRRV A+  
Sbjct: 372 SRKQGTQRTNSEKGSTRGRNKSKKSNAGEVSLASEGWVDPKSSTAIPKDAGKRRVHASDQ 431

Query: 371 SVGQWY 388
             G WY
Sbjct: 432 GDGHWY 437


>ref|XP_002522945.1| conserved hypothetical protein [Ricinus communis]
           gi|223537757|gb|EEF39375.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 477

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/128 (40%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = +2

Query: 8   QHGNPSNPLPPAYRYFYHDDPKIQRLVRNRLPYFFPLSVDDSRGNPN-ADAAVNYMSQFG 184
           Q  N ++PLPPAY YF HDD +IQ LVR+RLP F PL + ++R N   ++  +NYMSQF 
Sbjct: 295 QSWNLADPLPPAYNYFCHDDSRIQSLVRSRLPNFSPLCIINNRENHQPSEPVINYMSQFN 354

Query: 185 QNEXXXXXXXXXXXXXXXXXXNNFNDSHAEEVSVVSGKRVSRQKSARIPKDAGKRRVSAN 364
                                +    S  +E    S   +  ++SA IPKDAGKRRV AN
Sbjct: 355 GEASKKGGTCRNNNKDSTRGRSKSKKSIVKEALPASQVWIDPKRSASIPKDAGKRRVHAN 414

Query: 365 CSSVGQWY 388
             + G WY
Sbjct: 415 GQAAGHWY 422


>ref|XP_002278240.2| PREDICTED: uncharacterized protein LOC100255618 [Vitis vinifera]
          Length = 470

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = +2

Query: 23  SNPLPPAYRYFYHDDPKIQRLVRNRLPYFFPLSVDDSRGNPNADAAVNYMSQF--GQNEX 196
           ++PLPPA+RYF+H DP+IQ+LVR+RLP F PL V  +    +  + ++YMSQF  G+   
Sbjct: 294 ADPLPPAHRYFFHADPRIQKLVRSRLPNFSPLGVVSNTNMQHGASVIDYMSQFSHGEASK 353

Query: 197 XXXXXXXXXXXXXXXXXNNFNDSHAEEVSVVSGKRVSRQKSARIPKDAGKRRVSANCSSV 376
                             N    +A+E    SG  V+ +  A IPK AGK +V AN  S 
Sbjct: 354 KQVNQDVSIGRSTMQARKNARKFNADEALNASGSWVNPKSCASIPKKAGKGQVHANGQSA 413

Query: 377 GQWY 388
            +WY
Sbjct: 414 SRWY 417


>emb|CBI26632.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = +2

Query: 23  SNPLPPAYRYFYHDDPKIQRLVRNRLPYFFPLSVDDSRGNPNADAAVNYMSQF--GQNEX 196
           ++PLPPA+RYF+H DP+IQ+LVR+RLP F PL V  +    +  + ++YMSQF  G+   
Sbjct: 245 ADPLPPAHRYFFHADPRIQKLVRSRLPNFSPLGVVSNTNMQHGASVIDYMSQFSHGEASK 304

Query: 197 XXXXXXXXXXXXXXXXXNNFNDSHAEEVSVVSGKRVSRQKSARIPKDAGKRRVSANCSSV 376
                             N    +A+E    SG  V+ +  A IPK AGK +V AN  S 
Sbjct: 305 KQVNQDVSIGRSTMQARKNARKFNADEALNASGSWVNPKSCASIPKKAGKGQVHANGQSA 364

Query: 377 GQWY 388
            +WY
Sbjct: 365 SRWY 368


>emb|CAN63914.1| hypothetical protein VITISV_004851 [Vitis vinifera]
          Length = 510

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = +2

Query: 23  SNPLPPAYRYFYHDDPKIQRLVRNRLPYFFPLSVDDSRGNPNADAAVNYMSQF--GQNEX 196
           ++PLPPA+RYF+H DP+IQ+LVR+RLP F PL V  +    +  + ++YMSQF  G+   
Sbjct: 334 ADPLPPAHRYFFHADPRIQKLVRSRLPNFSPLGVVSNTNMQHGASVIDYMSQFSHGEASK 393

Query: 197 XXXXXXXXXXXXXXXXXNNFNDSHAEEVSVVSGKRVSRQKSARIPKDAGKRRVSANCSSV 376
                             N    +A+E    SG  V+ +  A IPK AGK +V AN  S 
Sbjct: 394 KQVNQDVSIGRSTMQARKNARKFNADEALNASGSWVNPKSCASIPKKAGKGQVHANGQSA 453

Query: 377 GQWY 388
            +WY
Sbjct: 454 SRWY 457


Top