BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035945
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal...   152   3e-35
ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar...   152   3e-35
ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34
ref|XP_002889139.1| pentatricopeptide repeat-containing protein ...   146   2e-33

>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/117 (62%), Positives = 97/117 (82%)
 Frame = -3

Query: 351 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEDILNKFENAGMQSYRF 172
           S + +K+  D  K++ KIM+S PKL L++ L+ESGIRVS  +VE++L +FENAGM +Y+F
Sbjct: 4   SGEIIKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQF 63

Query: 171 FEWAGKQRNYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRVKGVLNVETFCVIMRK 1
           FEWAGKQRNYTHS+ +YHT+I SLAKIRQY++MWD+V+ MR   +LNVETFC+IMRK
Sbjct: 64  FEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRK 120


>gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/117 (58%), Positives = 97/117 (82%)
 Frame = -3

Query: 351 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEDILNKFENAGMQSYRF 172
           S++ ++   D  K +SK++MSSP+L L+S L++SG+RVS E+VED+LN+F NAG+ +YRF
Sbjct: 25  SSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRF 84

Query: 171 FEWAGKQRNYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRVKGVLNVETFCVIMRK 1
           F+W+ KQR+Y HSV +YH +I S AKIRQYKLMWD++++MR K +LNVETFC++MRK
Sbjct: 85  FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRK 141


>ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial; Flags: Precursor
           gi|332197848|gb|AEE35969.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/117 (58%), Positives = 97/117 (82%)
 Frame = -3

Query: 351 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEDILNKFENAGMQSYRF 172
           S++ ++   D  K +SK++MSSP+L L+S L++SG+RVS E+VED+LN+F NAG+ +YRF
Sbjct: 61  SSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRF 120

Query: 171 FEWAGKQRNYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRVKGVLNVETFCVIMRK 1
           F+W+ KQR+Y HSV +YH +I S AKIRQYKLMWD++++MR K +LNVETFC++MRK
Sbjct: 121 FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRK 177


>ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 461

 Score =  147 bits (371), Expect = 9e-34
 Identities = 65/117 (55%), Positives = 96/117 (82%)
 Frame = -3

Query: 351 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEDILNKFENAGMQSYRF 172
           S   ++   +A +++ K+MM+ P L L++ LN++G+RVS +LVE++L +FENAGM ++RF
Sbjct: 5   SEAMIQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRF 64

Query: 171 FEWAGKQRNYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRVKGVLNVETFCVIMRK 1
           FEWA KQR Y+HS+ +YH +I SLAKIRQY+++WD+VS+MR KG+LNVETFC++MRK
Sbjct: 65  FEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRK 121


>ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334980|gb|EFH65398.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/117 (55%), Positives = 95/117 (81%)
 Frame = -3

Query: 351 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEDILNKFENAGMQSYRF 172
           S++ ++   D  K +SK++MSSP+L ++S L++SG+RVS E+VED+L +F NAG+ +YRF
Sbjct: 26  SSEQVRDVADVAKNISKVLMSSPQLVIDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRF 85

Query: 171 FEWAGKQRNYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRVKGVLNVETFCVIMRK 1
           F+W+ KQR+Y HSV +YH +I S AKIRQYKLMWD++++M  K +LNVETFC++MRK
Sbjct: 86  FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKMLNVETFCIVMRK 142