BLASTX nr result

ID: Coptis21_contig00035896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035896
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    82   6e-14
ref|XP_003554892.1| PREDICTED: probable receptor-like protein ki...    80   2e-13
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/114 (35%), Positives = 64/114 (56%)
 Frame = +3

Query: 90  ETVLNIGSFHIASQLFVVRPWKLFVEAETKELKTIPIWIIMKIFPLEMWDSRGFSQVASA 269
           E +L+ G +H+  +  ++R W   +  ET    ++P+WI +   PLE+W   G   VASA
Sbjct: 17  EWILSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELWTDAGLVVVASA 76

Query: 270 IGIPMFTDKPTEEMTRTTYARICVEVDVDCKFQSEVPLVIDEVKAMSIPIEYNW 431
           IG P+  D  T+E  R +YARICVE++VD     E+ + +   +   +P+ Y W
Sbjct: 77  IGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITVNL-RGEEFIVPVTYEW 129


>ref|XP_003554892.1| PREDICTED: probable receptor-like protein kinase At5g15080-like
           [Glycine max]
          Length = 680

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/127 (33%), Positives = 64/127 (50%)
 Frame = +3

Query: 3   RSWHLKHKFIMKTYGDSMFTXXXXXXXDRETVLNIGSFHIASQLFVVRPWKLFVEAETKE 182
           R+W+      +  + D  F        D E V+  G + I S   V++ W+     +   
Sbjct: 113 RNWNFVQLPNLYYHDDGYFLLRFKSHDDMEVVVMKGPYTIRSMPVVLKEWRTDFSLKQDM 172

Query: 183 LKTIPIWIIMKIFPLEMWDSRGFSQVASAIGIPMFTDKPTEEMTRTTYARICVEVDVDCK 362
           L+TIPIWI +   PL +W  R  +++ SAIG PM TD+ T    R +YAR+ VEVD+  K
Sbjct: 173 LRTIPIWIKLPKLPLYLWGERSLNKIGSAIGTPMVTDECTTHKLRVSYARMLVEVDITRK 232

Query: 363 FQSEVPL 383
              E+ +
Sbjct: 233 LVEEIAI 239


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
 Frame = +3

Query: 45  GDSMFTXXXXXXXDRETVLNIGS-FHIASQLFVVRPWKLFVEAETKELKTIPIWIIMKIF 221
           G  +F         +E  L  G  F+  S+ F+++PW   +  E KELK+ PIWI +   
Sbjct: 75  GSGVFVLDFESAHGKELALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPIWIKLPNL 134

Query: 222 PLEMWDSRGFSQVASAIGIPMFTDKPTEEMTRTTYARICVEVDVDCKFQSEVPLVIDEVK 401
            L +W      ++AS +G P+F D  T       +AR+CVEVD D      V +  D+  
Sbjct: 135 RLHLWSPEALGKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGY 194

Query: 402 AMSIPIEYNW 431
           +    +EY W
Sbjct: 195 SYDQKVEYEW 204


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/106 (33%), Positives = 56/106 (52%)
 Frame = +3

Query: 114 FHIASQLFVVRPWKLFVEAETKELKTIPIWIIMKIFPLEMWDSRGFSQVASAIGIPMFTD 293
           F+  S+ F+++PW   +  E KELK+ P+WI +    L +W     S++AS +G P+F D
Sbjct: 99  FYDGSKPFILKPWSRDLSLEIKELKSAPVWIKLPNLRLHLWSPEALSKIASLVGRPLFAD 158

Query: 294 KPTEEMTRTTYARICVEVDVDCKFQSEVPLVIDEVKAMSIPIEYNW 431
             T       +AR+CVEVD D      V +  D+  +    +EY W
Sbjct: 159 TVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYDQKVEYEW 204


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
 Frame = +3

Query: 24  KFIMKTYG-------DSMFTXXXXXXXDRET-VLNIGSFHIASQLFVVRPWKLFVEAETK 179
           K I  +YG       D+ F        DR T VL    +H+A+   V++ W+  ++    
Sbjct: 176 KRIWSSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQFLKD 235

Query: 180 ELKTIPIWIIMKIFPLEMWDSRGFSQVASAIGIPMFTDKPTEEMTRTTYARICVEVDVDC 359
           +L  +P+W+ +   PLE W  +G S VASAIG+P+  D  T    R +YAR+CVE+D   
Sbjct: 236 DLARVPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEIDASK 295

Query: 360 KFQSEVPLVIDEVKAMSIPIEYNW 431
               E  L       ++I  EY W
Sbjct: 296 TLVKEYDLRCPNGLFITISAEYEW 319


Top