BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035882
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281970.1| PREDICTED: U-box domain-containing protein 2...   246   2e-63
emb|CAN83909.1| hypothetical protein VITISV_035044 [Vitis vinifera]   246   2e-63
ref|XP_002264273.1| PREDICTED: U-box domain-containing protein 2...   221   1e-55
emb|CAN66628.1| hypothetical protein VITISV_025009 [Vitis vinifera]   221   1e-55
ref|XP_003630199.1| U-box domain-containing protein [Medicago tr...   216   3e-54

>ref|XP_002281970.1| PREDICTED: U-box domain-containing protein 27 [Vitis vinifera]
          Length = 412

 Score =  246 bits (629), Expect = 2e-63
 Identities = 139/239 (58%), Positives = 174/239 (72%), Gaps = 10/239 (4%)
 Frame = +2

Query: 17  MVKNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
           MV+++LFITVPS F+CPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQVL+S
Sbjct: 1   MVRDNLFITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHS 60

Query: 197 KDFVPNHNLHRLIQIWSNSDSQSQNC---------LISRQEIRDLVKKIESVKESCSDDE 349
           KDFVPNH L RLIQIWSNS     N           +S  + RDL+K+IES  E C +  
Sbjct: 61  KDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLEC- 119

Query: 350 FNKIIEFAKVSDESLKFLAGLEGFVLVIVDVLSRNEELNRKKEQVIRLLELVSIEYRDKD 529
            +KII FA+ S+ES KFLA ++GFV ++VD L          EQV+R+L+++  E+ D  
Sbjct: 120 MSKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHK 179

Query: 530 RLMISMAK-NQNLLASILLVLRQGSFDSRISSLRVLEFIASINTESKVHIAETQGILTE 703
           +L  SM K +++ L+SILLVL+QGS +SRI+S RVLE IA I+ ESK+ IAE  G+ +E
Sbjct: 180 QLANSMLKSDRDCLSSILLVLQQGSAESRIASARVLESIA-IDAESKLLIAEKDGLFSE 237


>emb|CAN83909.1| hypothetical protein VITISV_035044 [Vitis vinifera]
          Length = 383

 Score =  246 bits (629), Expect = 2e-63
 Identities = 139/239 (58%), Positives = 174/239 (72%), Gaps = 10/239 (4%)
 Frame = +2

Query: 17  MVKNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
           MV+++LFITVPS F+CPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQVL+S
Sbjct: 1   MVRDNLFITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHS 60

Query: 197 KDFVPNHNLHRLIQIWSNSDSQSQNC---------LISRQEIRDLVKKIESVKESCSDDE 349
           KDFVPNH L RLIQIWSNS     N           +S  + RDL+K+IES  E C +  
Sbjct: 61  KDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLEC- 119

Query: 350 FNKIIEFAKVSDESLKFLAGLEGFVLVIVDVLSRNEELNRKKEQVIRLLELVSIEYRDKD 529
            +KII FA+ S+ES KFLA ++GFV ++VD L          EQV+R+L+++  E+ D  
Sbjct: 120 MSKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHK 179

Query: 530 RLMISMAK-NQNLLASILLVLRQGSFDSRISSLRVLEFIASINTESKVHIAETQGILTE 703
           +L  SM K +++ L+SILLVL+QGS +SRI+S RVLE IA I+ ESK+ IAE  G+ +E
Sbjct: 180 QLANSMLKSDRDCLSSILLVLQQGSAESRIASARVLESIA-IDAESKLLIAEKDGLFSE 237


>ref|XP_002264273.1| PREDICTED: U-box domain-containing protein 27-like [Vitis vinifera]
          Length = 400

 Score =  221 bits (563), Expect = 1e-55
 Identities = 121/229 (52%), Positives = 165/229 (72%), Gaps = 1/229 (0%)
 Frame = +2

Query: 17  MVKNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
           MV+NDLFI +PSFFKCPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQ+L S
Sbjct: 1   MVRNDLFINIPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQTWLDNGNNTCPATMQILPS 60

Query: 197 KDFVPNHNLHRLIQIWSNSDSQSQNCLISRQEIRDLVKKIESVKESCSDDEFNKIIEFAK 376
           KDFVPNH L RLIQ+W+ S S   + ++S +++   V  IE+ +         KI+++A 
Sbjct: 61  KDFVPNHTLQRLIQVWAQS-SAVPSPVVSSRQVGAWVADIENRRFGA----LPKILDYAS 115

Query: 377 VSDESLKFLAGLEGFVLVIVDVLSRNEELNRKKEQVIRLLELVSIEYRDKDRLM-ISMAK 553
            SDE+ +F+A L+GFV V+  VL          E V+R+L+LV +E   K+++  + +  
Sbjct: 116 SSDENRRFVASLDGFVPVVAGVLGNAGAGIEILELVVRILDLVMVEKGVKEQIQGLILKS 175

Query: 554 NQNLLASILLVLRQGSFDSRISSLRVLEFIASINTESKVHIAETQGILT 700
           N++ L++ILL+L +GS DS+I+S R+LE IA I+ ESK  I+E +G+L+
Sbjct: 176 NRDHLSAILLILEKGSSDSKIASARILEAIA-IDPESKRSISEREGLLS 223


>emb|CAN66628.1| hypothetical protein VITISV_025009 [Vitis vinifera]
          Length = 400

 Score =  221 bits (562), Expect = 1e-55
 Identities = 121/229 (52%), Positives = 164/229 (71%), Gaps = 1/229 (0%)
 Frame = +2

Query: 17  MVKNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
           MV+NDLFI +PSFFKCPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQ L S
Sbjct: 1   MVRNDLFINIPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQTWLDNGNNTCPATMQXLPS 60

Query: 197 KDFVPNHNLHRLIQIWSNSDSQSQNCLISRQEIRDLVKKIESVKESCSDDEFNKIIEFAK 376
           KDFVPNH L RLIQ+W+ S S   + ++S +++   V  IE+ +         KI+++A 
Sbjct: 61  KDFVPNHTLQRLIQVWAQS-SAVPSPVVSSRQVGAWVADIENRRFGA----LPKILDYAS 115

Query: 377 VSDESLKFLAGLEGFVLVIVDVLSRNEELNRKKEQVIRLLELVSIEYRDKDRLM-ISMAK 553
            SDE+ +F+A L+GFV V+  VL          E V+R+L+LV +E   K+++  + +  
Sbjct: 116 SSDENRRFVASLDGFVPVVAGVLGNAGAXIEILELVVRILDLVMVEKGVKEQIQGLILKS 175

Query: 554 NQNLLASILLVLRQGSFDSRISSLRVLEFIASINTESKVHIAETQGILT 700
           N++ L++ILL+L +GS DS+I+S R+LE IA I+ ESK  I+E +G+L+
Sbjct: 176 NRDHLSAILLILEKGSSDSKIASARILEAIA-IDPESKRSISEREGLLS 223


>ref|XP_003630199.1| U-box domain-containing protein [Medicago truncatula]
           gi|357519901|ref|XP_003630239.1| U-box domain-containing
           protein [Medicago truncatula]
           gi|355524221|gb|AET04675.1| U-box domain-containing
           protein [Medicago truncatula]
           gi|355524261|gb|AET04715.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 418

 Score =  216 bits (551), Expect = 3e-54
 Identities = 128/246 (52%), Positives = 172/246 (69%), Gaps = 17/246 (6%)
 Frame = +2

Query: 17  MVKNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
           MV++DL ITVPS F+CPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQ+L +
Sbjct: 1   MVRDDLCITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQILQT 60

Query: 197 KDFVPNHNLHRLIQIWSNS-----DSQSQNCLISRQEIRDLVKKIESVKESCSDDEFN-- 355
           KDFVPN  L RLIQIWS+S     DS          + RD +    +  ES S+++F+  
Sbjct: 61  KDFVPNRTLQRLIQIWSDSVRHRVDSPESPLSTESVDRRDQLIVAITDFESGSENQFDSL 120

Query: 356 -KIIEFAKVSDESLKFLAGLEGFVLVIVDVL-------SRNEELNRKKEQVIRLLELVSI 511
            KI+ FAK S+E+  FLA  EGFV V+V  L        R+ EL    EQV+  L+LV  
Sbjct: 121 VKIVRFAKDSEENCVFLAKTEGFVCVLVSFLDNVDGGVERSVEL---LEQVVIALDLVLC 177

Query: 512 EYRDKDRLMISMAKNQ--NLLASILLVLRQGSFDSRISSLRVLEFIASINTESKVHIAET 685
           +  +++ ++ S  +N+  ++L S+LLVL+QGS +S+I+S+RVL+FIA ++ ESK+ +AE 
Sbjct: 178 KIENRESILKSKKENESKSILDSLLLVLQQGSCESKIASVRVLKFIA-VDAESKLLVAEK 236

Query: 686 QGILTE 703
           +G+L+E
Sbjct: 237 EGLLSE 242