BLASTX nr result

ID: Coptis21_contig00035878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035878
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271515.2| PREDICTED: probable lysine-specific demethyl...   142   2e-32
ref|XP_002529883.1| transcription factor, putative [Ricinus comm...   133   2e-29
ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]...   131   5e-29
ref|XP_003524241.1| PREDICTED: probable lysine-specific demethyl...   130   8e-29
ref|XP_003568682.1| PREDICTED: probable lysine-specific demethyl...   130   1e-28

>ref|XP_002271515.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
            vinifera]
          Length = 1118

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/148 (50%), Positives = 100/148 (67%), Gaps = 6/148 (4%)
 Frame = +2

Query: 92   DNGYPGTSRGTKLFGFDLLNPSPTSSAHLTGAVKFKKL---NMKLCLSGPS---QKLDMH 253
            DNG P  S G+KLFG D+L   P SS   +   K + L   ++K C +  +    K++  
Sbjct: 808  DNGNPCISDGSKLFGADILVSLPHSSTLPSSLPKTEILGSSDVKACATDQTCLIPKMNFC 867

Query: 254  VEPLNIGEVVPGKLWSCKQAIFPRGFRSRVRFLSALNPSQKCYYVSEILDAGLLGPIFKV 433
            VEP++ G V+ GK W  KQAIFP+GF SRV+F S  +P+Q CYY+SE+LDAGLLGP+FKV
Sbjct: 868  VEPMHFGTVLFGKPWCSKQAIFPKGFTSRVKFFSVCDPTQMCYYISEVLDAGLLGPLFKV 927

Query: 434  TVEDLPNETFTDVSAQKCWEMVVDRLNK 517
            T E  P+ETF +VS +KCWEMV+ +L +
Sbjct: 928  TSEGCPSETFANVSPEKCWEMVLQKLQQ 955


>ref|XP_002529883.1| transcription factor, putative [Ricinus communis]
           gi|223530610|gb|EEF32486.1| transcription factor,
           putative [Ricinus communis]
          Length = 935

 Score =  133 bits (334), Expect = 2e-29
 Identities = 58/88 (65%), Positives = 76/88 (86%)
 Frame = +2

Query: 254 VEPLNIGEVVPGKLWSCKQAIFPRGFRSRVRFLSALNPSQKCYYVSEILDAGLLGPIFKV 433
           VEP+N G ++ GKLW  KQ IFP+GFRSRV+FLS L+P + C Y+SEI+DAGLLGP+FKV
Sbjct: 693 VEPINFGSIMLGKLWCSKQVIFPKGFRSRVQFLSVLDPRKSCSYISEIVDAGLLGPLFKV 752

Query: 434 TVEDLPNETFTDVSAQKCWEMVVDRLNK 517
           ++E+ P+ETFT+VSA+KCWEMV+ RLN+
Sbjct: 753 SLEEYPSETFTNVSAEKCWEMVLQRLNE 780


>ref|XP_002317068.1| jumonji domain protein [Populus trichocarpa]
           gi|222860133|gb|EEE97680.1| jumonji domain protein
           [Populus trichocarpa]
          Length = 753

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/97 (59%), Positives = 77/97 (79%)
 Frame = +2

Query: 224 SGPSQKLDMHVEPLNIGEVVPGKLWSCKQAIFPRGFRSRVRFLSALNPSQKCYYVSEILD 403
           S P +KL+  VEP+N+G V+ GKLW CKQAIFP+GFRS+V+F S  +P++ C Y+SE+ D
Sbjct: 601 SSPVKKLNPCVEPINVGSVIFGKLWCCKQAIFPKGFRSQVKFFSVRDPTKICTYISEVQD 660

Query: 404 AGLLGPIFKVTVEDLPNETFTDVSAQKCWEMVVDRLN 514
           AG LGP+FKV++E+ P E F DVS +KCWEMV+ RLN
Sbjct: 661 AGPLGPLFKVSLEECPGEIFADVSIEKCWEMVLQRLN 697


>ref|XP_003524241.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
           max]
          Length = 948

 Score =  130 bits (328), Expect = 8e-29
 Identities = 58/93 (62%), Positives = 74/93 (79%)
 Frame = +2

Query: 236 QKLDMHVEPLNIGEVVPGKLWSCKQAIFPRGFRSRVRFLSALNPSQKCYYVSEILDAGLL 415
           QK  + VEP+N+G V+ GKLW  K AI+P+GF+SRV+F S L+P + C Y+SE+ DAG L
Sbjct: 698 QKFGISVEPVNLGSVICGKLWCSKHAIYPKGFKSRVKFFSILDPPRICNYLSEVYDAGFL 757

Query: 416 GPIFKVTVEDLPNETFTDVSAQKCWEMVVDRLN 514
           GPIFKVT+E+LPNE FT+ SA KCWE V+DRLN
Sbjct: 758 GPIFKVTMEELPNEAFTNTSADKCWESVLDRLN 790


>ref|XP_003568682.1| PREDICTED: probable lysine-specific demethylase JMJ14-like
            [Brachypodium distachyon]
          Length = 991

 Score =  130 bits (327), Expect = 1e-28
 Identities = 78/171 (45%), Positives = 103/171 (60%), Gaps = 1/171 (0%)
 Frame = +2

Query: 8    TDFADSNNHLSEIFLSVPSDGSHPSCSRDNGYPGTSRGTKLFGFDL-LNPSPTSSAHLTG 184
            + F+ S+  LSE+           SC + N  P +    KLFGFD+  N + TS + ++ 
Sbjct: 690  SQFSQSSKCLSEL-----------SCPKGNSTPSSKTTKKLFGFDIECNVAKTSDSQVSQ 738

Query: 185  AVKFKKLNMKLCLSGPSQKLDMHVEPLNIGEVVPGKLWSCKQAIFPRGFRSRVRFLSALN 364
             VK     +   +S P+  L   VEPL  G V+ GK W   QAIFP+GFRSRV F S L+
Sbjct: 739  LVKPSTSQLDE-VSRPTI-LWSTVEPLEYGTVMVGKNWCNHQAIFPKGFRSRVTFHSVLD 796

Query: 365  PSQKCYYVSEILDAGLLGPIFKVTVEDLPNETFTDVSAQKCWEMVVDRLNK 517
            P++ C YVSE+LDAGLLGP+FKVTVEDLP  +FT  S  +CW  V DR+N+
Sbjct: 797  PTKTCGYVSEVLDAGLLGPLFKVTVEDLPEISFTHTSPMECWNSVRDRVNE 847


Top