BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035874
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266...   145   4e-33
emb|CBI33596.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807...   136   2e-30
ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi...   134   6e-30
gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis th...   134   1e-29

>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
          Length = 1449

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/104 (67%), Positives = 83/104 (79%), Gaps = 5/104 (4%)
 Frame = -3

Query: 298 SKVTAQLLTQVLKISPSFVIELPLNQTVLIDGCEVTLIDANHCPGAVQFLFRVND----- 134
           S  TA+LL +VL +S  FV  L ++Q VLIDGCEV L+DANHCPGAVQFLF+V       
Sbjct: 140 SNTTARLLVEVLGVSSLFVYPLAVSQPVLIDGCEVALLDANHCPGAVQFLFKVPGVDGRF 199

Query: 133 KRFVHTGDFRFCNSMKLEPVVKEFVGADSVFLDTTYCNPKFVFP 2
           +R+VHTGDFRFC SMKLEP + EFVG+++VFLDTTYCNPKFVFP
Sbjct: 200 ERYVHTGDFRFCESMKLEPCLGEFVGSEAVFLDTTYCNPKFVFP 243


>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
          Length = 1390

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/104 (67%), Positives = 83/104 (79%), Gaps = 5/104 (4%)
 Frame = -3

Query: 298 SKVTAQLLTQVLKISPSFVIELPLNQTVLIDGCEVTLIDANHCPGAVQFLFRVND----- 134
           S  TA+LL +VL +S  FV  L ++Q VLIDGCEV L+DANHCPGAVQFLF+V       
Sbjct: 97  SNTTARLLVEVLGVSSLFVYPLAVSQPVLIDGCEVALLDANHCPGAVQFLFKVPGVDGRF 156

Query: 133 KRFVHTGDFRFCNSMKLEPVVKEFVGADSVFLDTTYCNPKFVFP 2
           +R+VHTGDFRFC SMKLEP + EFVG+++VFLDTTYCNPKFVFP
Sbjct: 157 ERYVHTGDFRFCESMKLEPCLGEFVGSEAVFLDTTYCNPKFVFP 200


>ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
          Length = 1402

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/106 (63%), Positives = 77/106 (72%), Gaps = 7/106 (6%)
 Frame = -3

Query: 298 SKVTAQLLTQVLKISPSFVIELPLNQTVLIDGCEVTLIDANHCPGAVQFLFRVNDK---- 131
           S  TA LL ++L I  +F++ LPL Q + IDG  VTL+DANHCPGAVQFLF V       
Sbjct: 87  SHTTAALLRRILHIPAAFIVPLPLRQPLRIDGAHVTLLDANHCPGAVQFLFSVPRATADA 146

Query: 130 ---RFVHTGDFRFCNSMKLEPVVKEFVGADSVFLDTTYCNPKFVFP 2
              R+VHTGDFRFCNSM  EP +  FVGAD+VFLDTTYCNPKFVFP
Sbjct: 147 AALRYVHTGDFRFCNSMVSEPALAPFVGADAVFLDTTYCNPKFVFP 192


>ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
           gi|223532518|gb|EEF34307.1| DNA ligase I, putative
           [Ricinus communis]
          Length = 1360

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/103 (60%), Positives = 79/103 (76%), Gaps = 4/103 (3%)
 Frame = -3

Query: 298 SKVTAQLLTQVLKISPSFVIELPLNQTVLIDGCEVTLIDANHCPGAVQFLFRVND----K 131
           S++TA L+T++L +   FV  LPLN TV+IDG E+TLIDANHCPGAVQ LF+V      +
Sbjct: 95  SQITANLVTRILNVPSQFVYPLPLNDTVIIDGSEITLIDANHCPGAVQLLFKVRSSGTFE 154

Query: 130 RFVHTGDFRFCNSMKLEPVVKEFVGADSVFLDTTYCNPKFVFP 2
            +VHTGDFR+   MK   ++++FVG D+VFLDTTYCNPKFVFP
Sbjct: 155 MYVHTGDFRYSREMKEVGILRDFVGCDAVFLDTTYCNPKFVFP 197


>gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana]
          Length = 1417

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/104 (59%), Positives = 78/104 (75%), Gaps = 5/104 (4%)
 Frame = -3

Query: 298 SKVTAQLLTQVLKISPSFVIELPLNQTVLIDGCEVTLIDANHCPGAVQFLFRVN-----D 134
           S  TA+L+ ++L++   FV  LP+NQ V IDG EV LI+ANHCPGAVQFLF+V       
Sbjct: 106 SHKTARLVAEILQVPSQFVFALPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGF 165

Query: 133 KRFVHTGDFRFCNSMKLEPVVKEFVGADSVFLDTTYCNPKFVFP 2
           +++VHTGDFRFC+ M+ +P +  FVG D VFLDTTYCNPKFVFP
Sbjct: 166 EKYVHTGDFRFCDEMRFDPFLNGFVGCDGVFLDTTYCNPKFVFP 209