BLASTX nr result

ID: Coptis21_contig00035872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035872
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]   113   1e-23
ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250...   108   6e-22
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   107   8e-22
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     104   8e-21
emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                103   1e-20

>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/102 (53%), Positives = 74/102 (72%)
 Frame = +1

Query: 4    PPSIASYVPGSTAVHAVDVALRNRDRTLACLKANMATAQERMKRLADSHRTERSFEVDDW 183
            PP + +YVPG++ V AVD  LR+RD  L  L+ N+  AQ RMK  AD HR + SF V D+
Sbjct: 1214 PPRLLAYVPGTSXVQAVDEYLRDRDAILRELRYNLLQAQNRMKCQADQHRRDASFAVGDY 1273

Query: 184  VYLRLQQYRQTTAANQAYTKLSPKFHGPFQVLQKIGNVAYKL 309
            VYL+LQ YRQT+ A +   KL+P+F GP+QV++K+G+VAYKL
Sbjct: 1274 VYLKLQPYRQTSVAFRGSMKLAPRFFGPYQVIEKVGSVAYKL 1315


>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
          Length = 1406

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/103 (50%), Positives = 73/103 (70%)
 Frame = +1

Query: 1   PPPSIASYVPGSTAVHAVDVALRNRDRTLACLKANMATAQERMKRLADSHRTERSFEVDD 180
           PPP I +Y  GST++ A+D AL  RD  L  LK N+  AQ RM + +++HR +   EV D
Sbjct: 503 PPPIIPAYTQGSTSIQALDEALVERDALLRTLKENLRQAQHRMTQKSNAHRRDLQLEVGD 562

Query: 181 WVYLRLQQYRQTTAANQAYTKLSPKFHGPFQVLQKIGNVAYKL 309
            V +RLQ YRQTTAA++ Y KL+ +++GP+QVL++IG VAY+L
Sbjct: 563 MVLVRLQPYRQTTAAHRPYQKLAKRYYGPYQVLERIGAVAYRL 605


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/103 (47%), Positives = 69/103 (66%)
 Frame = +1

Query: 1    PPPSIASYVPGSTAVHAVDVALRNRDRTLACLKANMATAQERMKRLADSHRTERSFEVDD 180
            PPP +  Y PG+T +  V+  L+ RD  +  L+ N+  AQ+RMK+ AD   T RSF + D
Sbjct: 1272 PPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGD 1331

Query: 181  WVYLRLQQYRQTTAANQAYTKLSPKFHGPFQVLQKIGNVAYKL 309
             VYLRLQ Y+Q +   +   KLSP+F+GP++VL+KIG VAY+L
Sbjct: 1332 LVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTVAYRL 1374


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1    PPPSIASYVPGSTAVHAVDVALRNRDRTLACLKANMATAQERMKRLADSHRTERSFEVDD 180
            PPP    Y+PG ++   VD +L+ R+  +A LK ++  AQ RMK+ ADSHR++R F+V D
Sbjct: 1363 PPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFHLLRAQNRMKQYADSHRSQREFQVGD 1422

Query: 181  WVYLRLQQYRQTTAANQAYT-KLSPKFHGPFQVLQKIGNVAYKL 309
            +VYL+LQ YRQ +   +    KLSP+F+GPF+V  K+G VAYKL
Sbjct: 1423 FVYLKLQPYRQQSLKTKGVPHKLSPRFYGPFRVTDKVGTVAYKL 1466


>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/103 (50%), Positives = 67/103 (65%)
 Frame = +1

Query: 1    PPPSIASYVPGSTAVHAVDVALRNRDRTLACLKANMATAQERMKRLADSHRTERSFEVDD 180
            PP     Y P ST V AVD +   R++ +  L AN+  AQ RMK  AD HRT+R F V D
Sbjct: 1303 PPAIHLPYCPQSTIVEAVDRSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGD 1362

Query: 181  WVYLRLQQYRQTTAANQAYTKLSPKFHGPFQVLQKIGNVAYKL 309
            WV L+LQ YRQ++  ++A  KLSP+F GP+QVL ++G VAY L
Sbjct: 1363 WVLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHRVGKVAYTL 1405


Top