BLASTX nr result

ID: Coptis21_contig00035859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035859
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310337.1| single myb histone [Populus trichocarpa] gi|...   111   5e-23
ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis] gi...   111   7e-23
gb|ABK96429.1| unknown [Populus trichocarpa x Populus deltoides]      111   7e-23
ref|XP_003538788.1| PREDICTED: uncharacterized protein LOC100796...   110   1e-22
ref|XP_003524694.1| PREDICTED: uncharacterized protein LOC100779...   110   1e-22

>ref|XP_002310337.1| single myb histone [Populus trichocarpa]
           gi|222853240|gb|EEE90787.1| single myb histone [Populus
           trichocarpa]
          Length = 293

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = -3

Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53
           MGAPKQ+WT EEEAALKAG+LKHG  KWR I  DPEFS++L LRSNVDLKDKWRN+NVTA
Sbjct: 1   MGAPKQKWTSEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA 60

Query: 52  QYGSRR 35
            +GSR+
Sbjct: 61  IWGSRK 66


>ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis]
           gi|223535437|gb|EEF37107.1| Histone H1.1, putative
           [Ricinus communis]
          Length = 303

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/66 (78%), Positives = 58/66 (87%)
 Frame = -3

Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53
           MGAPKQ+WT EEEAALKAG+LKHG  KWR I  DPEFS+IL LRSNVDLKDKWRN+NVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPEFSAILRLRSNVDLKDKWRNINVTA 60

Query: 52  QYGSRR 35
            +GSR+
Sbjct: 61  IWGSRQ 66


>gb|ABK96429.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 140

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = -3

Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53
           MGAPKQ+WT EEEAALKAG+LKHG  KWR I  DPEFS++L LRSNVDLKDKWRN+NVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA 60

Query: 52  QYGSRR 35
            +GSR+
Sbjct: 61  IWGSRK 66


>ref|XP_003538788.1| PREDICTED: uncharacterized protein LOC100796539 [Glycine max]
          Length = 313

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = -3

Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53
           MGAPKQ+WT EEEAALKAG++KHG  KWR I  DPEFSSIL +RSNVDLKDKWRN+NVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60

Query: 52  QYGSRR 35
            +GSR+
Sbjct: 61  IWGSRQ 66


>ref|XP_003524694.1| PREDICTED: uncharacterized protein LOC100779583 [Glycine max]
          Length = 295

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = -3

Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53
           MGAPKQ+WT EEEAALKAG+LKHG  KWR I  DPEFS+IL +RSNVDLKDKWRN+NVTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVLKHGAGKWRTILTDPEFSAILRMRSNVDLKDKWRNINVTA 60

Query: 52  QYGSRR 35
            +GSR+
Sbjct: 61  IWGSRQ 66


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