BLASTX nr result
ID: Coptis21_contig00035859
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035859 (309 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310337.1| single myb histone [Populus trichocarpa] gi|... 111 5e-23 ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis] gi... 111 7e-23 gb|ABK96429.1| unknown [Populus trichocarpa x Populus deltoides] 111 7e-23 ref|XP_003538788.1| PREDICTED: uncharacterized protein LOC100796... 110 1e-22 ref|XP_003524694.1| PREDICTED: uncharacterized protein LOC100779... 110 1e-22 >ref|XP_002310337.1| single myb histone [Populus trichocarpa] gi|222853240|gb|EEE90787.1| single myb histone [Populus trichocarpa] Length = 293 Score = 111 bits (278), Expect = 5e-23 Identities = 51/66 (77%), Positives = 58/66 (87%) Frame = -3 Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53 MGAPKQ+WT EEEAALKAG+LKHG KWR I DPEFS++L LRSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTSEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA 60 Query: 52 QYGSRR 35 +GSR+ Sbjct: 61 IWGSRK 66 >ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis] gi|223535437|gb|EEF37107.1| Histone H1.1, putative [Ricinus communis] Length = 303 Score = 111 bits (277), Expect = 7e-23 Identities = 52/66 (78%), Positives = 58/66 (87%) Frame = -3 Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53 MGAPKQ+WT EEEAALKAG+LKHG KWR I DPEFS+IL LRSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPEFSAILRLRSNVDLKDKWRNINVTA 60 Query: 52 QYGSRR 35 +GSR+ Sbjct: 61 IWGSRQ 66 >gb|ABK96429.1| unknown [Populus trichocarpa x Populus deltoides] Length = 140 Score = 111 bits (277), Expect = 7e-23 Identities = 51/66 (77%), Positives = 58/66 (87%) Frame = -3 Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53 MGAPKQ+WT EEEAALKAG+LKHG KWR I DPEFS++L LRSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA 60 Query: 52 QYGSRR 35 +GSR+ Sbjct: 61 IWGSRK 66 >ref|XP_003538788.1| PREDICTED: uncharacterized protein LOC100796539 [Glycine max] Length = 313 Score = 110 bits (275), Expect = 1e-22 Identities = 51/66 (77%), Positives = 58/66 (87%) Frame = -3 Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53 MGAPKQ+WT EEEAALKAG++KHG KWR I DPEFSSIL +RSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA 60 Query: 52 QYGSRR 35 +GSR+ Sbjct: 61 IWGSRQ 66 >ref|XP_003524694.1| PREDICTED: uncharacterized protein LOC100779583 [Glycine max] Length = 295 Score = 110 bits (275), Expect = 1e-22 Identities = 51/66 (77%), Positives = 58/66 (87%) Frame = -3 Query: 232 MGAPKQRWTEEEEAALKAGILKHGLSKWRIISKDPEFSSILCLRSNVDLKDKWRNMNVTA 53 MGAPKQ+WT EEEAALKAG+LKHG KWR I DPEFS+IL +RSNVDLKDKWRN+NVTA Sbjct: 1 MGAPKQKWTAEEEAALKAGVLKHGAGKWRTILTDPEFSAILRMRSNVDLKDKWRNINVTA 60 Query: 52 QYGSRR 35 +GSR+ Sbjct: 61 IWGSRQ 66