BLASTX nr result

ID: Coptis21_contig00035858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035858
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]             142   9e-32
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...   142   9e-32
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   126   5e-27
ref|XP_003637285.1| ABC transporter C family member [Medicago tr...   124   2e-26
ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...   119   6e-25

>gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]
          Length = 296

 Score =  142 bits (357), Expect = 9e-32
 Identities = 78/242 (32%), Positives = 128/242 (52%)
 Frame = +2

Query: 2   FGVNLITILVIAVLGLTKRNAQTSTRIRRLIFLEKIFWYLLPSLGACLSFYEMVLLTKRA 181
           FG N+ T++VI ++G+T+R+ + S   RR+    KI  + +P+LGA +SF+E+V+L ++ 
Sbjct: 31  FGANMATLIVIVLVGVTRRSGRRS---RRIHLSAKILLFTVPALGAFVSFFEIVVLLRKI 87

Query: 182 LQEHSMVYHEWVFRFSQXXXXXXXXXXXXSDYWTLVFCDRVLCFWWIAKPLLTTSHLVSV 361
           +  +   + E++F  S              DYW ++FC+R+LC WWI KP L   HL  V
Sbjct: 88  VGGYPFAFQEYLFPGSLFGVWVTVLLVSICDYWFVIFCNRLLCLWWIIKPFLWIPHLQVV 147

Query: 362 YSSLQVMDVCKESSSILLDXXXXXXXXXXXXMQVSTRSRKCGXXXXXXXXXXXXXXXCHR 541
           ++S +++    ES    LD               S RS  C                 H 
Sbjct: 148 FTSQELLPCLGESFLAFLDFTFGILINIIKSKWASHRS-SCDSIEEPLLPCKVDAKG-HC 205

Query: 542 DLNINALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEES 721
            +   A + W I+TFK ++ VM+ G ++QLDF+DL+QLP +++ S C++ L  CWE ++ 
Sbjct: 206 GILGLANNLWRIITFKSIDSVMENGVKRQLDFNDLLQLPEDMDSSCCYNLLQHCWEAQQR 265

Query: 722 KN 727
            N
Sbjct: 266 NN 267


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score =  142 bits (357), Expect = 9e-32
 Identities = 78/242 (32%), Positives = 128/242 (52%)
 Frame = +2

Query: 2   FGVNLITILVIAVLGLTKRNAQTSTRIRRLIFLEKIFWYLLPSLGACLSFYEMVLLTKRA 181
           FG N+ T++VI ++G+T+R+ + S   RR+    KI  + +P+LGA +SF+E+V+L ++ 
Sbjct: 31  FGANMATLIVIVLVGVTRRSGRRS---RRIHLSAKILLFTVPALGAFVSFFEIVVLLRKI 87

Query: 182 LQEHSMVYHEWVFRFSQXXXXXXXXXXXXSDYWTLVFCDRVLCFWWIAKPLLTTSHLVSV 361
           +  +   + E++F  S              DYW ++FC+R+LC WWI KP L   HL  V
Sbjct: 88  VGGYPFAFQEYLFPGSLFGVWVTVLLVSICDYWFVIFCNRLLCLWWIIKPFLWIPHLQVV 147

Query: 362 YSSLQVMDVCKESSSILLDXXXXXXXXXXXXMQVSTRSRKCGXXXXXXXXXXXXXXXCHR 541
           ++S +++    ES    LD               S RS  C                 H 
Sbjct: 148 FTSQELLPCLGESFLAFLDFTFGILINIIKSKWASHRS-SCDSIEEPLLPCKVDAKG-HC 205

Query: 542 DLNINALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETEES 721
            +   A + W I+TFK ++ VM+ G ++QLDF+DL+QLP +++ S C++ L  CWE ++ 
Sbjct: 206 GILGLANNLWRIITFKSIDSVMENGVKRQLDFNDLLQLPEDMDSSCCYNLLQHCWEAQQR 265

Query: 722 KN 727
            N
Sbjct: 266 NN 267


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score =  126 bits (316), Expect = 5e-27
 Identities = 75/211 (35%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
 Frame = +2

Query: 101 EKIFWYLLPSLGACLSFYEMVLLTKRALQEHSMVYHEWVFRFSQXXXXXXXXXXXXSDYW 280
           EK  +  LP LGA +SF +++LL  + L  + + YHEW+FR SQ                
Sbjct: 9   EKTVFRFLPFLGALVSFMDLILLVNKELHGNFIAYHEWLFRSSQLIVWTVIIISSMCACL 68

Query: 281 TLVFCDRVLCFWWIAKPLLTTSHLVSVYSSLQVMDVCKESSSILLDXXXXXXXXXXXXMQ 460
             VFC+R LCFWWI K LL   HL   + S++V+   K+S  +LLD             +
Sbjct: 69  HDVFCNRFLCFWWIMKSLLGILHLHRAFGSMEVVKCLKDSCVVLLDVMFGISINIIRIKR 128

Query: 461 VSTRSRKCGXXXXXXXXXXXXXXXCHRDLNINALSYWHILTFKFVNPVMDCGSRKQLDFD 640
            S +S                    H D   NA SYW  +TF+ +  VM+ G  KQL FD
Sbjct: 129 ASPKSSSMEDPLLSVDTDIEEGF--HGDSG-NAKSYWDHMTFRTITSVMNHGVIKQLGFD 185

Query: 641 DLIQLPIELNPSSCFSTLLSCWETE-ESKNP 730
           DL+ LP ++ PS+C   L SCW  +  S NP
Sbjct: 186 DLLSLPNDMEPSTCHDKLSSCWRVQLSSPNP 216


>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score =  124 bits (312), Expect = 2e-26
 Identities = 74/244 (30%), Positives = 120/244 (49%), Gaps = 2/244 (0%)
 Frame = +2

Query: 2   FGVNLITILVIAVLGLTKRNAQTSTRIR--RLIFLEKIFWYLLPSLGACLSFYEMVLLTK 175
           F VN++TI +I VLG+ ++ +   T+    ++  LEK   Y +P++GAC S  E++ L K
Sbjct: 43  FAVNVVTIAMILVLGIKQKISGRGTQRSDAQMSLLEKFVLYFVPAIGACCSVLEIMFLLK 102

Query: 176 RALQEHSMVYHEWVFRFSQXXXXXXXXXXXXSDYWTLVFCDRVLCFWWIAKPLLTTSHLV 355
           +    H + YH W+   S+                  +  +RVLCFWWI  P+L   HL+
Sbjct: 103 KEHDGHFVGYHRWLHSCSELLVWANIILFTKCASIHCIVFNRVLCFWWILNPILGIFHLI 162

Query: 356 SVYSSLQVMDVCKESSSILLDXXXXXXXXXXXXMQVSTRSRKCGXXXXXXXXXXXXXXXC 535
           + + SL+V     ES  +L++             ++S++S                    
Sbjct: 163 TNFPSLEVSACIMESLVVLMNLSFGVVINVIRLKRLSSKSSLLEDPLLSNGGDLEEGG-- 220

Query: 536 HRDLNINALSYWHILTFKFVNPVMDCGSRKQLDFDDLIQLPIELNPSSCFSTLLSCWETE 715
           + DL  N  ++W  +TFKF++PVM+ G  KQLD DDL+ L  ++ PS C   +L+ W  +
Sbjct: 221 NHDLENNC-NFWDFMTFKFISPVMNQGVLKQLDSDDLLPLLPDMGPSFCHDIILNSWRAQ 279

Query: 716 ESKN 727
            S N
Sbjct: 280 VSNN 283


>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis
           sativus]
          Length = 2377

 Score =  119 bits (298), Expect = 6e-25
 Identities = 64/210 (30%), Positives = 102/210 (48%)
 Frame = +2

Query: 98  LEKIFWYLLPSLGACLSFYEMVLLTKRALQEHSMVYHEWVFRFSQXXXXXXXXXXXXSDY 277
           LEKIF++ LP++G CLS +EM+ L ++      + YHEW+   S                
Sbjct: 22  LEKIFFHFLPAIGLCLSLFEMMFLLRKLFTGDVVEYHEWLSTSSLLAVWIFTSIFANCSN 81

Query: 278 WTLVFCDRVLCFWWIAKPLLTTSHLVSVYSSLQVMDVCKESSSILLDXXXXXXXXXXXXM 457
           +  +F +++LC WWI + +      VS Y+  +++     S  +LLD             
Sbjct: 82  FEHIFNNKMLCLWWIVRAIFGIFIFVSTYADFEILKTVNSSFVVLLDVLFGTLAFI---- 137

Query: 458 QVSTRSRKCGXXXXXXXXXXXXXXXCHRDLNINALSYWHILTFKFVNPVMDCGSRKQLDF 637
            +S+   K                  H   N +  S W++LTF  V  VMD G++KQL+F
Sbjct: 138 -ISSEHAKSSSMEDSLLYVDVDLEDSHMGNNEDKQSCWNLLTFNSVTSVMDDGAKKQLNF 196

Query: 638 DDLIQLPIELNPSSCFSTLLSCWETEESKN 727
           +DL+QLP E++PS C + L  CW+ + S+N
Sbjct: 197 EDLLQLPNEMDPSFCHNKLSFCWKDQCSRN 226


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