BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035855
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40500.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]   150   1e-34
ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_003637737.1| Pentatricopeptide repeat-containing protein ...   133   1e-29

>emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/94 (73%), Positives = 81/94 (86%)
 Frame = +2

Query: 2    VDLLGRGGYLDEAWYFIQTMPLEPDASVWGALLGSCRIHKNLDLAEIAAKYLFKLEPYNS 181
            VDLLGR GYLDEAW  I TMPL+PDA++WGALLGSCRIHKNL  AE AAK LFKLEP NS
Sbjct: 905  VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNS 964

Query: 182  ANYLLMMNLYSAENRWEDVENLRDLMGVVGLKSK 283
            ANY+LMMNLYS  NRWED+++LR+LMG  G++++
Sbjct: 965  ANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNR 998


>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/94 (73%), Positives = 81/94 (86%)
 Frame = +2

Query: 2   VDLLGRGGYLDEAWYFIQTMPLEPDASVWGALLGSCRIHKNLDLAEIAAKYLFKLEPYNS 181
           VDLLGR GYLDEAW  I TMPL+PDA++WGALLGSCRIHKNL  AE AAK LFKLEP NS
Sbjct: 685 VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNS 744

Query: 182 ANYLLMMNLYSAENRWEDVENLRDLMGVVGLKSK 283
           ANY+LMMNLYS  NRWED+++LR+LMG  G++++
Sbjct: 745 ANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNR 778


>emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/94 (73%), Positives = 81/94 (86%)
 Frame = +2

Query: 2    VDLLGRGGYLDEAWYFIQTMPLEPDASVWGALLGSCRIHKNLDLAEIAAKYLFKLEPYNS 181
            VDLLGR GYLDEAW  I TMPL+PDA++WGALLGSCRIHKNL  AE AAK LFKLEP NS
Sbjct: 1180 VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNS 1239

Query: 182  ANYLLMMNLYSAENRWEDVENLRDLMGVVGLKSK 283
            ANY+LMMNLYS  NRWED+++LR+LMG  G++++
Sbjct: 1240 ANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNR 1273


>ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|222860966|gb|EEE98508.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  149 bits (377), Expect = 2e-34
 Identities = 67/93 (72%), Positives = 81/93 (87%)
 Frame = +2

Query: 5   DLLGRGGYLDEAWYFIQTMPLEPDASVWGALLGSCRIHKNLDLAEIAAKYLFKLEPYNSA 184
           DLLGR GYLDEAW FIQTMP++PDASVWGA+LGSCRIH N++ AEIAAK LFKLEPYNSA
Sbjct: 272 DLLGRAGYLDEAWDFIQTMPIKPDASVWGAMLGSCRIHGNIEFAEIAAKELFKLEPYNSA 331

Query: 185 NYLLMMNLYSAENRWEDVENLRDLMGVVGLKSK 283
           NY+LM++LY+  NRWEDV+ ++DLM   G+K +
Sbjct: 332 NYVLMLSLYAMSNRWEDVDRIKDLMDTRGIKPR 364


>ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503672|gb|AES84875.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 561

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/92 (67%), Positives = 78/92 (84%)
 Frame = +2

Query: 2   VDLLGRGGYLDEAWYFIQTMPLEPDASVWGALLGSCRIHKNLDLAEIAAKYLFKLEPYNS 181
           VDLLG+ G+LDEA +FI+TMP++PDAS+WGALL SC+IHKN+ LAEIAA+ LFK+EP NS
Sbjct: 333 VDLLGKSGFLDEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNS 392

Query: 182 ANYLLMMNLYSAENRWEDVENLRDLMGVVGLK 277
           ANY+LMMNLYS+ NRW  VE L+  M V+ +K
Sbjct: 393 ANYVLMMNLYSSLNRWVAVERLKHSMTVLAMK 424