BLASTX nr result

ID: Coptis21_contig00035816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035816
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably ina...    84   9e-15
ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, ...    83   3e-14
ref|XP_004144659.1| PREDICTED: probably inactive leucine-rich re...    81   8e-14

>ref|XP_002323303.1| predicted protein [Populus trichocarpa] gi|222867933|gb|EEF05064.1|
           predicted protein [Populus trichocarpa]
          Length = 887

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/97 (48%), Positives = 58/97 (59%)
 Frame = +3

Query: 39  MATTFKVLIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 218
           MATT      L L  + F+  T  +  E DIL++FK SI+DP NSLS+WS +SN H CNW
Sbjct: 1   MATTCTYTFALCLSLAFFMCSTAASSTEADILLSFKDSIQDPKNSLSSWSNSSNAHHCNW 60

Query: 219 TGVXXXXXXXXXXXXXXLNLQGLNLSGEISPSLCQLS 329
           TG+              LNLQ LNLSGEIS S+C L+
Sbjct: 61  TGI--TCSTSPSLTVTSLNLQNLNLSGEISSSICDLT 95


>ref|XP_002283010.2| PREDICTED: LOW QUALITY PROTEIN: probably inactive leucine-rich
           repeat receptor-like protein kinase At5g06940-like
           [Vitis vinifera]
          Length = 887

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/96 (50%), Positives = 58/96 (60%)
 Frame = +3

Query: 39  MATTFKVLIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 218
           MA+     ++ SL ++ FI+   +A  E +IL+TFK SIEDP+  LSTWS  S TH CNW
Sbjct: 1   MASFCTYPLFFSLTFAFFIV--ASASSEAEILLTFKASIEDPMKYLSTWSNTSETHHCNW 58

Query: 219 TGVXXXXXXXXXXXXXXLNLQGLNLSGEISPSLCQL 326
           TGV              LNLQ LNLSGEIS SLC L
Sbjct: 59  TGV--TCTTTPPLSVTSLNLQSLNLSGEISASLCGL 92


>ref|XP_002330987.1| predicted protein [Populus trichocarpa] gi|222872917|gb|EEF10048.1|
           predicted protein [Populus trichocarpa]
          Length = 883

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/97 (45%), Positives = 59/97 (60%)
 Frame = +3

Query: 39  MATTFKVLIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 218
           MATT      L L  + F+  + ++  E D+L++FK SI+DP N+LS+WS NS  H CNW
Sbjct: 1   MATTCTCTFVLCLSLTFFMFSSASST-EADVLLSFKGSIQDPKNTLSSWSSNSTVHYCNW 59

Query: 219 TGVXXXXXXXXXXXXXXLNLQGLNLSGEISPSLCQLS 329
           TG+              LNLQ LNLSGEIS S+C+L+
Sbjct: 60  TGI--TCTTSPPLTLTSLNLQSLNLSGEISSSICELT 94


>ref|XP_002526749.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223533938|gb|EEF35663.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 891

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/87 (50%), Positives = 55/87 (63%)
 Frame = +3

Query: 69  LSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNWTGVXXXXXXX 248
           LSL  S  +   ++A  E DIL++FK SI+DP N+LS+WS  SN H CNWTGV       
Sbjct: 13  LSLTLSFTLSILSSASTEADILVSFKASIQDPKNALSSWSSGSNVHHCNWTGV-TCSSTP 71

Query: 249 XXXXXXXLNLQGLNLSGEISPSLCQLS 329
                  LNLQ LNLSGEIS ++CQL+
Sbjct: 72  SLVTVTSLNLQSLNLSGEISSTICQLA 98


>ref|XP_004144659.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At5g06940-like [Cucumis sativus]
           gi|449517277|ref|XP_004165672.1| PREDICTED: probably
           inactive leucine-rich repeat receptor-like protein
           kinase At5g06940-like [Cucumis sativus]
          Length = 889

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = +3

Query: 39  MATTFKVLIYLSLFYSVFILRTTNALQETDILITFKTSIEDPLNSLSTWSKNSNTHICNW 218
           MA+ FK    LSL ++ FIL  +++ + T  L+TFK SI+D  NSLS W  +S TH CNW
Sbjct: 1   MASPFKPPFLLSLAFAFFILGYSSSEEPT--LLTFKASIKDSTNSLSNWVSSSQTHFCNW 58

Query: 219 TGV-XXXXXXXXXXXXXXLNLQGLNLSGEISPSLCQL 326
           TG+               ++LQGLNLSGEIS S+C+L
Sbjct: 59  TGIACVTSSSPSLLSVSAIDLQGLNLSGEISSSICEL 95


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