BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035770
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   240   8e-62
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   240   1e-61
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   214   6e-54
ref|XP_003598203.1| Pentatricopeptide repeat-containing protein ...   213   1e-53
sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-c...   213   1e-53

>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  240 bits (613), Expect = 8e-62
 Identities = 114/140 (81%), Positives = 128/140 (91%), Gaps = 1/140 (0%)
 Frame = -1

Query: 461 KDTDSALTLYRKMGES-SCMPSLQTYNILVGMFSKLNKMEIVQEIWNDMKVSGAGPDLDS 285
           KD+D+AL LYRKM E  SC+P + TYNILVGMF KLN+MEIVQEIW+DMK SGAGPDLDS
Sbjct: 386 KDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDS 445

Query: 284 YTLLIHGLCEKKKWREACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLD 105
           YTLLIHGLCEK+KW+EAC +FVEMIEKG+LPQKITFETLY+GLIQ+DML+TWRRLKKKL+
Sbjct: 446 YTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLE 505

Query: 104 EESITFGSEFQDLLFKPYRR 45
           EESITFGSEFQ   FKPYRR
Sbjct: 506 EESITFGSEFQQYHFKPYRR 525


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/140 (81%), Positives = 128/140 (91%), Gaps = 1/140 (0%)
 Frame = -1

Query: 461 KDTDSALTLYRKMGES-SCMPSLQTYNILVGMFSKLNKMEIVQEIWNDMKVSGAGPDLDS 285
           KD+D+AL LYRKM E  SC+P + TYNILVGMF KLN+MEIVQEIW+DMK SGAGPDLDS
Sbjct: 386 KDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDS 445

Query: 284 YTLLIHGLCEKKKWREACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLD 105
           YTLLIHGLCEK+KW+EAC +FVEMIEKG+LPQKITFETLY+GLIQ+DML+TWRRLKKKL+
Sbjct: 446 YTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLE 505

Query: 104 EESITFGSEFQDLLFKPYRR 45
           EESITFGSEFQ   FKPYRR
Sbjct: 506 EESITFGSEFQXYHFKPYRR 525


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  214 bits (545), Expect = 6e-54
 Identities = 103/140 (73%), Positives = 118/140 (84%), Gaps = 1/140 (0%)
 Frame = -1

Query: 461 KDTDSALTLYRKMGESSCMP-SLQTYNILVGMFSKLNKMEIVQEIWNDMKVSGAGPDLDS 285
           KD +SAL LY+KM E       L +YNIL+ MF  LN+++IV EIW D+K SG GPDLDS
Sbjct: 409 KDAESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDS 468

Query: 284 YTLLIHGLCEKKKWREACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLD 105
           YT+LIHGLCEK+KWREAC++FVEMIEKG LPQK+TFETLYKGLIQ+DMLRTWRRLKKKLD
Sbjct: 469 YTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLD 528

Query: 104 EESITFGSEFQDLLFKPYRR 45
           EESITFGSEFQ+   KPYRR
Sbjct: 529 EESITFGSEFQNYQLKPYRR 548


>ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487251|gb|AES68454.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 503

 Score =  213 bits (543), Expect = 1e-53
 Identities = 99/140 (70%), Positives = 116/140 (82%), Gaps = 1/140 (0%)
 Frame = -1

Query: 461 KDTDSALTLYRKMGESS-CMPSLQTYNILVGMFSKLNKMEIVQEIWNDMKVSGAGPDLDS 285
           KD D AL  ++KM E   C P+  TY +L+ MF K + + +V+EIWNDM  SG GPDLDS
Sbjct: 364 KDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDS 423

Query: 284 YTLLIHGLCEKKKWREACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLD 105
           YT+LIHGLCE KKWREACQYFVEMIEKGFLPQK+TFETLY+GLIQ+DMLRTWRRLKK+LD
Sbjct: 424 YTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLD 483

Query: 104 EESITFGSEFQDLLFKPYRR 45
           +ESITFGSEFQ+   KPY+R
Sbjct: 484 QESITFGSEFQNYHLKPYKR 503


>sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g13420, mitochondrial; Flags: Precursor
           gi|110738270|dbj|BAF01064.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 509

 Score =  213 bits (543), Expect = 1e-53
 Identities = 98/139 (70%), Positives = 115/139 (82%)
 Frame = -1

Query: 461 KDTDSALTLYRKMGESSCMPSLQTYNILVGMFSKLNKMEIVQEIWNDMKVSGAGPDLDSY 282
           KD + A+ LYRKM    C PS QTYN+L+G F  L KME V+EIW+D+K S  GPDLDSY
Sbjct: 371 KDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSY 430

Query: 281 TLLIHGLCEKKKWREACQYFVEMIEKGFLPQKITFETLYKGLIQADMLRTWRRLKKKLDE 102
           T L+HGLC K+KW+EAC YFVEMIE+GFLPQK+TFETLYKGLIQ++ +RTWRRLKKKLDE
Sbjct: 431 TSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDE 490

Query: 101 ESITFGSEFQDLLFKPYRR 45
           ESITFGSEFQ   F+PY+R
Sbjct: 491 ESITFGSEFQRYPFEPYKR 509