BLASTX nr result

ID: Coptis21_contig00035760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035760
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282690.2| PREDICTED: E3 SUMO-protein ligase MMS21-like...   164   9e-39
ref|XP_004146042.1| PREDICTED: E3 SUMO-protein ligase MMS21-like...   141   5e-32
emb|CBI20251.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002317010.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30
dbj|BAB02569.1| unnamed protein product [Arabidopsis thaliana]        134   6e-30

>ref|XP_002282690.2| PREDICTED: E3 SUMO-protein ligase MMS21-like [Vitis vinifera]
          Length = 261

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/124 (64%), Positives = 99/124 (79%)
 Frame = +3

Query: 18  RIRNAATTLYDDNQSLITEIRKFMSTMKGIAVDLEKENQHEMVKELENGVVKLLGVSDEC 197
           R+RNAA+TLY DNQSLI E RK M  MK +AVDLE++ Q +MVKELE+ VV+LLG S++C
Sbjct: 17  RLRNAASTLYSDNQSLIAEFRKAMILMKEVAVDLERDGQSQMVKELEDAVVELLGTSEDC 76

Query: 198 TYLSSAIDSVKNNYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQKRPFLRQFKEAIWNVH 377
           T  S+AI SV N +QP  E TDF+KLFE+E+AK+KA S+S  PQ  P LRQF+EA+WNVH
Sbjct: 77  TQFSAAIQSVGNEHQPRPELTDFKKLFEDEVAKLKA-SSSFAPQSHPLLRQFREAVWNVH 135

Query: 378 HAGQ 389
           HAGQ
Sbjct: 136 HAGQ 139


>ref|XP_004146042.1| PREDICTED: E3 SUMO-protein ligase MMS21-like [Cucumis sativus]
           gi|449510330|ref|XP_004163634.1| PREDICTED: E3
           SUMO-protein ligase MMS21-like [Cucumis sativus]
          Length = 248

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/124 (55%), Positives = 90/124 (72%)
 Frame = +3

Query: 18  RIRNAATTLYDDNQSLITEIRKFMSTMKGIAVDLEKENQHEMVKELENGVVKLLGVSDEC 197
           RI++AAT ++ DNQSL+ E+RK +  MK I VDLEKE Q++MVKELE  +V+LL   + C
Sbjct: 15  RIKSAATIMHSDNQSLLAELRKTLIMMKEIGVDLEKEKQYKMVKELEKSIVELLSAYENC 74

Query: 198 TYLSSAIDSVKNNYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQKRPFLRQFKEAIWNVH 377
              SSAI SV N Y+P +E TDFEKL ++E+AK+   S+S      P +RQF+EAIWNVH
Sbjct: 75  NNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSESSSS-NFANHPIIRQFREAIWNVH 133

Query: 378 HAGQ 389
           HAGQ
Sbjct: 134 HAGQ 137


>emb|CBI20251.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  135 bits (340), Expect = 3e-30
 Identities = 68/112 (60%), Positives = 87/112 (77%)
 Frame = +3

Query: 54  NQSLITEIRKFMSTMKGIAVDLEKENQHEMVKELENGVVKLLGVSDECTYLSSAIDSVKN 233
           N SL+ + RK M  MK +AVDLE++ Q +MVKELE+ VV+LLG S++CT  S+AI SV N
Sbjct: 218 NLSLL-KFRKAMILMKEVAVDLERDGQSQMVKELEDAVVELLGTSEDCTQFSAAIQSVGN 276

Query: 234 NYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQKRPFLRQFKEAIWNVHHAGQ 389
            +QP  E TDF+KLFE+E+AK+KA S+S  PQ  P LRQF+EA+WNVHHAGQ
Sbjct: 277 EHQPRPELTDFKKLFEDEVAKLKA-SSSFAPQSHPLLRQFREAVWNVHHAGQ 327


>ref|XP_002317010.1| predicted protein [Populus trichocarpa] gi|222860075|gb|EEE97622.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  135 bits (339), Expect = 4e-30
 Identities = 68/128 (53%), Positives = 89/128 (69%)
 Frame = +3

Query: 6   TSSTRIRNAATTLYDDNQSLITEIRKFMSTMKGIAVDLEKENQHEMVKELENGVVKLLGV 185
           ++S  +  +A+ L  +NQSLI E+RK  + MK IAVDLE+EN+   V ELEN V +LL  
Sbjct: 15  SASGIMTTSASMLCSENQSLIVEMRKVFNMMKEIAVDLERENESAKVNELENTVAELLAT 74

Query: 186 SDECTYLSSAIDSVKNNYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQKRPFLRQFKEAI 365
            ++CTY +SAI+SV N YQP  E TDF+KL  +E  K K G+ S  PQ  P LRQF+EA+
Sbjct: 75  YEDCTYQTSAIESVGNTYQPGAELTDFKKLLNDEFMKFK-GNKSSAPQNHPLLRQFREAV 133

Query: 366 WNVHHAGQ 389
           WNVHH+GQ
Sbjct: 134 WNVHHSGQ 141


>dbj|BAB02569.1| unnamed protein product [Arabidopsis thaliana]
          Length = 336

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/124 (52%), Positives = 89/124 (71%)
 Frame = +3

Query: 18  RIRNAATTLYDDNQSLITEIRKFMSTMKGIAVDLEKENQHEMVKELENGVVKLLGVSDEC 197
           RI+NA+  L  DN S + +IRK ++ MK IAV LEKENQ + VK+LEN V +LL +  +C
Sbjct: 100 RIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSVAELLDLHSDC 159

Query: 198 TYLSSAIDSVKNNYQPTDEATDFEKLFEEEIAKIKAGSNSVTPQKRPFLRQFKEAIWNVH 377
            + S+AI SV N YQP ++ TDF+KL ++E  K+KA  +SV PQ    +RQF+EA+WNVH
Sbjct: 160 NHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSV-PQNDHLMRQFREAVWNVH 218

Query: 378 HAGQ 389
           HAG+
Sbjct: 219 HAGE 222