BLASTX nr result

ID: Coptis21_contig00035755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035755
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613319.1| Resistance protein [Medicago truncatula] gi|...    62   6e-08
ref|XP_003613316.1| Cc-nbs-lrr resistance protein [Medicago trun...    59   4e-07
ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncat...    56   3e-06
ref|XP_003613323.1| NBS-LRR disease resistance-like protein [Med...    55   6e-06

>ref|XP_003613319.1| Resistance protein [Medicago truncatula] gi|355514654|gb|AES96277.1|
            Resistance protein [Medicago truncatula]
          Length = 973

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
 Frame = +1

Query: 37   NGTRVTRTE-ENFFLALKSLFIVHCPKLESLPFLPCLQHLTLSG-CTETVITXXXXXXXX 210
            N  R++R + EN F +L  L +  CPKL  LP LP L+ L + G C + ++         
Sbjct: 828  NLVRLSREDKENMFPSLSRLQVTECPKLSGLPCLPHLKDLRIEGKCNQDLVCSIHKLGSL 887

Query: 211  XXXXXXXXXEMFSFPEGLLRNLSSLETLEIRACYGLHSIPDEIEYL 348
                     ++  FP+G+LRNL+SL+ L+I   + L   P EI +L
Sbjct: 888  ESLRFKDNEDLTCFPDGMLRNLTSLKILDIYGLFKLEQFPTEIIHL 933


>ref|XP_003613316.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355514651|gb|AES96274.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 569

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = +1

Query: 37  NGTRVTRTE-ENFFLALKSLFIVHCPKLESLPFLPCLQHLTLSG-CTETVITXXXXXXXX 210
           N  R++R + EN F  L +L ++ CP L  LP LP L ++ + G C + +++        
Sbjct: 320 NLIRISREDRENLFPHLSALVVIECPNLLGLPCLPSLNYICIQGKCNQDLLSSIHKHGGL 379

Query: 211 XXXXXXXXXEMFSFPEGLLRNLSSLETLEIRACYGLHSIPDEIEYLT 351
                    E+  FP+G+LRNL SL+ L I +C  +  + + ++++T
Sbjct: 380 ESLCFYDNKELTCFPDGMLRNLISLKLLMIWSCSEIEVLDEALQHVT 426


>ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355517056|gb|AES98679.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 988

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/88 (34%), Positives = 47/88 (53%)
 Frame = +1

Query: 73   FLALKSLFIVHCPKLESLPFLPCLQHLTLSGCTETVITXXXXXXXXXXXXXXXXXEMFSF 252
            F  L +L I +CPK+  LP LP L+ L + GC   ++                   + SF
Sbjct: 835  FPCLSNLTISYCPKI-GLPCLPSLKDLYVEGCNNELLRSISTFRGLTQLILYEGEGITSF 893

Query: 253  PEGLLRNLSSLETLEIRACYGLHSIPDE 336
            PEG+ +NL+SL++L I +C  L S+P++
Sbjct: 894  PEGMFKNLTSLQSLSIISCNELESLPEQ 921


>ref|XP_003613323.1| NBS-LRR disease resistance-like protein [Medicago truncatula]
            gi|355514658|gb|AES96281.1| NBS-LRR disease
            resistance-like protein [Medicago truncatula]
          Length = 1228

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
 Frame = +1

Query: 64   ENFFLALKSLFIVHCPKLESLPFLPCLQHLTLSG-CTETVITXXXXXXXXXXXXXXXXXE 240
            EN    L    I  CPKL  LPFLP L  + +SG C   +++                  
Sbjct: 840  ENMLPHLSQFQIAECPKLLGLPFLPSLIDMRISGKCNTGLLSSIQKHVNLESLMFSGNEA 899

Query: 241  MFSFPEGLLRNLSSLETLEIRACYGLHSIPDEI 339
            +  FP+G+LRNL+SL+ +EI +   L S P EI
Sbjct: 900  LTCFPDGMLRNLNSLKKIEIYSLSTLESFPTEI 932


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