BLASTX nr result

ID: Coptis21_contig00035749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035749
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512647.1| hypothetical protein RCOM_1437950 [Ricinus c...    72   5e-11
ref|XP_002297867.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
emb|CAN84063.1| hypothetical protein VITISV_040487 [Vitis vinifera]    65   7e-09
emb|CBI38190.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002304651.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002512647.1| hypothetical protein RCOM_1437950 [Ricinus communis]
           gi|223548608|gb|EEF50099.1| hypothetical protein
           RCOM_1437950 [Ricinus communis]
          Length = 354

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 9/67 (13%)
 Frame = +2

Query: 170 YDGYGGCGDSF-TESFGFMNSLVKGYDCCI-------GSDLVIGPIMAEDESRTSSVNE- 322
           Y GYGGC   + TESFG M+ L +GYD CI       GSDLV+   MAEDESRT+S+NE 
Sbjct: 23  YGGYGGCAGGYNTESFGVMSQLEEGYDYCINEANCILGSDLVVANPMAEDESRTNSLNEA 82

Query: 323 AGSSSKD 343
           AGSSSKD
Sbjct: 83  AGSSSKD 89


>ref|XP_002297867.1| predicted protein [Populus trichocarpa] gi|222845125|gb|EEE82672.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 8/68 (11%)
 Frame = +2

Query: 179 YGGCGDSFTESFGFMNSLVKGYDCCI------GSDLVIGPI-MAEDESRTSSVN-EAGSS 334
           +GG   ++ ESFG M+ L +GYD C+      GSDLV+  I MAEDESRT+SVN EAGSS
Sbjct: 25  FGGGTSAYNESFGLMSRL-EGYDSCVSEACLLGSDLVVANIPMAEDESRTNSVNNEAGSS 83

Query: 335 SKDAQEEK 358
           SKD QEE+
Sbjct: 84  SKDVQEER 91


>emb|CAN84063.1| hypothetical protein VITISV_040487 [Vitis vinifera]
          Length = 341

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
 Frame = +2

Query: 176 GYGGCGDSFTESFGFMNSLVKGYDCC----IGSDLVIGPIMAEDESRTSSVNEAGSSSKD 343
           GYGG   ++ +    + S ++GYDCC    +GSDLV+ P MAE+ESR  SVNE GSSSKD
Sbjct: 17  GYGGYTGNYLDENVCLMSRLEGYDCCSEACLGSDLVLAP-MAENESRADSVNETGSSSKD 75

Query: 344 AQEEK 358
            QE++
Sbjct: 76  IQEDR 80


>emb|CBI38190.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
 Frame = +2

Query: 176 GYGGCGDSFTESFGFMNSLVKGYDCC----IGSDLVIGPIMAEDESRTSSVNEAGSSSKD 343
           GYG    ++ +    + S ++GYDCC    +GSDLV+ P MAE+ESR  SVNE GSSSKD
Sbjct: 17  GYGDYTGNYLDENVCLMSRLEGYDCCSEACLGSDLVLAP-MAENESRADSVNETGSSSKD 75

Query: 344 AQEEK 358
            QE++
Sbjct: 76  MQEDR 80


>ref|XP_002304651.1| predicted protein [Populus trichocarpa] gi|222842083|gb|EEE79630.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 9/63 (14%)
 Frame = +2

Query: 197 SFTESFGFMNSLVKGYD-------CCIGSDLVIGPI-MAEDESRTSSVN-EAGSSSKDAQ 349
           +F E FG M+ L +GY+       C +GSDLV+  I MAEDESRT+S+N EAGSSSKD Q
Sbjct: 27  TFKEGFGLMSRL-EGYEYSCVSEACLLGSDLVVANIPMAEDESRTNSLNNEAGSSSKDVQ 85

Query: 350 EEK 358
           EE+
Sbjct: 86  EER 88


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