BLASTX nr result
ID: Coptis21_contig00035749
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035749 (361 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512647.1| hypothetical protein RCOM_1437950 [Ricinus c... 72 5e-11 ref|XP_002297867.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 emb|CAN84063.1| hypothetical protein VITISV_040487 [Vitis vinifera] 65 7e-09 emb|CBI38190.3| unnamed protein product [Vitis vinifera] 62 5e-08 ref|XP_002304651.1| predicted protein [Populus trichocarpa] gi|2... 58 7e-07 >ref|XP_002512647.1| hypothetical protein RCOM_1437950 [Ricinus communis] gi|223548608|gb|EEF50099.1| hypothetical protein RCOM_1437950 [Ricinus communis] Length = 354 Score = 72.0 bits (175), Expect = 5e-11 Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 9/67 (13%) Frame = +2 Query: 170 YDGYGGCGDSF-TESFGFMNSLVKGYDCCI-------GSDLVIGPIMAEDESRTSSVNE- 322 Y GYGGC + TESFG M+ L +GYD CI GSDLV+ MAEDESRT+S+NE Sbjct: 23 YGGYGGCAGGYNTESFGVMSQLEEGYDYCINEANCILGSDLVVANPMAEDESRTNSLNEA 82 Query: 323 AGSSSKD 343 AGSSSKD Sbjct: 83 AGSSSKD 89 >ref|XP_002297867.1| predicted protein [Populus trichocarpa] gi|222845125|gb|EEE82672.1| predicted protein [Populus trichocarpa] Length = 348 Score = 66.2 bits (160), Expect = 3e-09 Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 8/68 (11%) Frame = +2 Query: 179 YGGCGDSFTESFGFMNSLVKGYDCCI------GSDLVIGPI-MAEDESRTSSVN-EAGSS 334 +GG ++ ESFG M+ L +GYD C+ GSDLV+ I MAEDESRT+SVN EAGSS Sbjct: 25 FGGGTSAYNESFGLMSRL-EGYDSCVSEACLLGSDLVVANIPMAEDESRTNSVNNEAGSS 83 Query: 335 SKDAQEEK 358 SKD QEE+ Sbjct: 84 SKDVQEER 91 >emb|CAN84063.1| hypothetical protein VITISV_040487 [Vitis vinifera] Length = 341 Score = 64.7 bits (156), Expect = 7e-09 Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 4/65 (6%) Frame = +2 Query: 176 GYGGCGDSFTESFGFMNSLVKGYDCC----IGSDLVIGPIMAEDESRTSSVNEAGSSSKD 343 GYGG ++ + + S ++GYDCC +GSDLV+ P MAE+ESR SVNE GSSSKD Sbjct: 17 GYGGYTGNYLDENVCLMSRLEGYDCCSEACLGSDLVLAP-MAENESRADSVNETGSSSKD 75 Query: 344 AQEEK 358 QE++ Sbjct: 76 IQEDR 80 >emb|CBI38190.3| unnamed protein product [Vitis vinifera] Length = 349 Score = 62.0 bits (149), Expect = 5e-08 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 4/65 (6%) Frame = +2 Query: 176 GYGGCGDSFTESFGFMNSLVKGYDCC----IGSDLVIGPIMAEDESRTSSVNEAGSSSKD 343 GYG ++ + + S ++GYDCC +GSDLV+ P MAE+ESR SVNE GSSSKD Sbjct: 17 GYGDYTGNYLDENVCLMSRLEGYDCCSEACLGSDLVLAP-MAENESRADSVNETGSSSKD 75 Query: 344 AQEEK 358 QE++ Sbjct: 76 MQEDR 80 >ref|XP_002304651.1| predicted protein [Populus trichocarpa] gi|222842083|gb|EEE79630.1| predicted protein [Populus trichocarpa] Length = 322 Score = 58.2 bits (139), Expect = 7e-07 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 9/63 (14%) Frame = +2 Query: 197 SFTESFGFMNSLVKGYD-------CCIGSDLVIGPI-MAEDESRTSSVN-EAGSSSKDAQ 349 +F E FG M+ L +GY+ C +GSDLV+ I MAEDESRT+S+N EAGSSSKD Q Sbjct: 27 TFKEGFGLMSRL-EGYEYSCVSEACLLGSDLVVANIPMAEDESRTNSLNNEAGSSSKDVQ 85 Query: 350 EEK 358 EE+ Sbjct: 86 EER 88