BLASTX nr result
ID: Coptis21_contig00035732
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035732 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004172144.1| PREDICTED: condensin complex subunit 3-like ... 60 2e-07 ref|XP_004153102.1| PREDICTED: condensin complex subunit 3-like,... 60 2e-07 ref|XP_002868528.1| EMB2656 [Arabidopsis lyrata subsp. lyrata] g... 55 4e-06 >ref|XP_004172144.1| PREDICTED: condensin complex subunit 3-like [Cucumis sativus] Length = 271 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 3/58 (5%) Frame = +3 Query: 3 IRFISIFAAHRDDTIS---DKFLEDFLRYLIIVSAALNKAVRFQSCQILSERLLRFLD 167 IRFIS+F+ RD + D FLE+FL++L++ S A NK+ RF++CQI+SE ++R D Sbjct: 85 IRFISLFSTSRDPNFASHADDFLEEFLKFLLVASCAANKSARFRACQIVSEIIMRLPD 142 >ref|XP_004153102.1| PREDICTED: condensin complex subunit 3-like, partial [Cucumis sativus] Length = 251 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 3/58 (5%) Frame = +3 Query: 3 IRFISIFAAHRDDTIS---DKFLEDFLRYLIIVSAALNKAVRFQSCQILSERLLRFLD 167 IRFIS+F+ RD + D FLE+FL++L++ S A NK+ RF++CQI+SE ++R D Sbjct: 85 IRFISLFSTSRDPNFASHADDFLEEFLKFLLVASCAANKSARFRACQIVSEIIMRLPD 142 >ref|XP_002868528.1| EMB2656 [Arabidopsis lyrata subsp. lyrata] gi|297314364|gb|EFH44787.1| EMB2656 [Arabidopsis lyrata subsp. lyrata] Length = 1050 Score = 55.5 bits (132), Expect = 4e-06 Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 4/59 (6%) Frame = +3 Query: 3 IRFISIFAAHR----DDTISDKFLEDFLRYLIIVSAALNKAVRFQSCQILSERLLRFLD 167 +RF + FA R DD+ D+FLE+FLR+L++ S A N+ RF++CQI+SE +LR D Sbjct: 88 VRFAAEFACLRSNSDDDSDCDEFLEEFLRFLVVGSVAANRNARFRACQIISEIILRLPD 146