BLASTX nr result

ID: Coptis21_contig00035723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035723
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264730.2| PREDICTED: uncharacterized protein LOC100250...   120   1e-25
emb|CAN67303.1| hypothetical protein VITISV_000736 [Vitis vinifera]   120   1e-25
ref|XP_002529792.1| conserved hypothetical protein [Ricinus comm...   103   2e-20
ref|XP_002867758.1| hypothetical protein ARALYDRAFT_914352 [Arab...    99   5e-19
gb|ABK28257.1| unknown [Arabidopsis thaliana]                          98   6e-19

>ref|XP_002264730.2| PREDICTED: uncharacterized protein LOC100250621 [Vitis vinifera]
          Length = 361

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
 Frame = +2

Query: 2   ALDQAASEDTSQLLYPCWKNSFEKPFLWFGDYHPCLFTNLLRSLLNEDSDDGDDFERSNE 181
           ALD AAS D +QLLYP W+NS EKPFLW GD+HP LFTNLLRS L++  DD DD +    
Sbjct: 159 ALDLAASNDVAQLLYPEWRNSLEKPFLWLGDFHPYLFTNLLRSFLDDGDDDDDDGDHEVG 218

Query: 182 KGLSF-------PLAWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQ 307
           +  SF        +AW  PS  L+ R+EQIEC LR MVP  V R R AQ
Sbjct: 219 ETCSFCDTPWQILMAWKNPSETLMARIEQIECALRLMVPALVARVRNAQ 267


>emb|CAN67303.1| hypothetical protein VITISV_000736 [Vitis vinifera]
          Length = 338

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
 Frame = +2

Query: 2   ALDQAASEDTSQLLYPCWKNSFEKPFLWFGDYHPCLFTNLLRSLLNEDSDDGDDFERSNE 181
           ALD AAS D +QLLYP W+NS EKPFLW GD+HP LFTNLLRS L++  DD DD +    
Sbjct: 136 ALDLAASNDVAQLLYPEWRNSLEKPFLWLGDFHPYLFTNLLRSFLDDGDDDDDDGDHEVG 195

Query: 182 KGLSF-------PLAWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQ 307
           +  SF        +AW  PS  L+ R+EQIEC LR MVP  V R R AQ
Sbjct: 196 ETCSFCDTPWQILMAWKNPSETLMARIEQIECALRLMVPALVARVRNAQ 244


>ref|XP_002529792.1| conserved hypothetical protein [Ricinus communis]
           gi|223530736|gb|EEF32606.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/107 (47%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
 Frame = +2

Query: 2   ALDQAASEDTSQL---LYPCWKNSFEKPFLWFGDYHPCLFTNLLRSLLNEDSDDGDDFER 172
           +LD A + D + L   L+P WKNS EKPFL+ GD HP  FTNL+RS L+++++  D+  R
Sbjct: 68  SLDLAVTTDPNNLPYLLFPSWKNSLEKPFLFLGDLHPYTFTNLIRSFLDQENNSDDENIR 127

Query: 173 SNEKGLSFP--LAWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQ 307
                  +P  +AW  PS NL+N++EQIECGLR +VP  +DR ++AQ
Sbjct: 128 DVVFDRPWPVIMAWKDPSRNLINKIEQIECGLRLIVPALMDRYKRAQ 174


>ref|XP_002867758.1| hypothetical protein ARALYDRAFT_914352 [Arabidopsis lyrata subsp.
           lyrata] gi|297313594|gb|EFH44017.1| hypothetical protein
           ARALYDRAFT_914352 [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
 Frame = +2

Query: 5   LDQAASEDT-SQLLYPCWKNSFEKPFLWFGDYHPCLFTNLLRSLLNEDSDDGDDFERSNE 181
           LD AA  +T   LL+P W+NS E PFL+ GD HP L TNLLRS ++ ++ D D+ + ++ 
Sbjct: 65  LDLAADPNTIPYLLFPSWRNSLETPFLFLGDIHPYLLTNLLRSFIDRENQDSDEDDETSL 124

Query: 182 KGLSFPL----AWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQ 307
             ++ PL    AW  PS  LV R++QIEC +R MVP  +DR RKAQ
Sbjct: 125 DLMNQPLKMTTAWKDPSDELVKRIDQIECTMRLMVPGLMDRMRKAQ 170


>gb|ABK28257.1| unknown [Arabidopsis thaliana]
          Length = 274

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/107 (46%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
 Frame = +2

Query: 5   LDQAASEDT-SQLLYPCWKNSFEKPFLWFGDYHPCLFTNLLRSLLNEDSDDGDDFERSN- 178
           LD AA  +T   LL+P W+NS E PFL+ GD HP L TNLLRS ++ ++ D DD +    
Sbjct: 65  LDLAADHNTIPYLLFPSWRNSLETPFLFLGDIHPYLLTNLLRSFIDRENQDSDDEDEETS 124

Query: 179 ----EKGLSFPLAWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQ 307
                + L   +AW  PS  LV R++QIEC +R MVP  +DR RK Q
Sbjct: 125 LDLVNQPLKMTMAWKDPSDELVKRIDQIECTMRLMVPGLMDRMRKTQ 171


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