BLASTX nr result

ID: Coptis21_contig00035710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035710
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43490.1| unknown [Medicago truncatula]                           55   5e-06

>gb|AFK43490.1| unknown [Medicago truncatula]
          Length = 118

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +1

Query: 4   RPSHDFLIVIVLVLSCLGVYGRLFAIICTCIWWFLVPRLKKERNVKGLMKKERRLSEGNL 183
           RPS     V++ +L  L V+GR FA +CTCI W++VP LK     K ++KK+  ++EG L
Sbjct: 42  RPSFYVPAVVIFILLLLTVFGRSFATLCTCIVWYMVPVLKDSSKEKNMIKKKDYVTEGLL 101


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