BLASTX nr result

ID: Coptis21_contig00035674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035674
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329728.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002264379.2| PREDICTED: UPF0176 protein pc0378-like [Viti...   136   2e-30
ref|XP_002892970.1| predicted protein [Arabidopsis lyrata subsp....   128   4e-28
ref|XP_004159612.1| PREDICTED: rhodanese-like domain-containing ...   127   1e-27
ref|XP_004136802.1| PREDICTED: rhodanese-like domain-containing ...   127   1e-27

>ref|XP_002329728.1| predicted protein [Populus trichocarpa] gi|222870636|gb|EEF07767.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/103 (69%), Positives = 83/103 (80%)
 Frame = +3

Query: 123 CYSFPPSSTKRAYSDHTPSSSFIVVNFYRFVFIQDPHHLVSTHLSFLKGLDIRGRIYLNE 302
           C + P SST        PS+ FIVVNFYRFVFI DPH  V+ HLSFLKGLDI GRIY+NE
Sbjct: 74  CATIPSSSTVA-----NPSNDFIVVNFYRFVFINDPHEEVAKHLSFLKGLDIHGRIYVNE 128

Query: 303 QGINAQFSGPSVDALMYLEWIKEDSRFSDILVQISPSVNGHSF 431
           QGINAQ+SGPS DAL Y+EW++ED RFSDILVQISP++NGH+F
Sbjct: 129 QGINAQYSGPSKDALAYVEWLREDFRFSDILVQISPALNGHAF 171


>ref|XP_002264379.2| PREDICTED: UPF0176 protein pc0378-like [Vitis vinifera]
          Length = 441

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/90 (71%), Positives = 75/90 (83%)
 Frame = +3

Query: 162 SDHTPSSSFIVVNFYRFVFIQDPHHLVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVD 341
           S+ +    FIVVNFYRFVFIQDP   VS HLSFL+G DI GR+Y+NEQGINAQ+SGPS D
Sbjct: 77  SELSNDGGFIVVNFYRFVFIQDPELEVSKHLSFLQGFDIHGRVYINEQGINAQYSGPSKD 136

Query: 342 ALMYLEWIKEDSRFSDILVQISPSVNGHSF 431
           AL Y+EW++ED RFSDILVQISP+ NGH+F
Sbjct: 137 ALAYVEWLREDHRFSDILVQISPASNGHAF 166


>ref|XP_002892970.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338812|gb|EFH69229.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 448

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/82 (71%), Positives = 71/82 (86%)
 Frame = +3

Query: 186 FIVVNFYRFVFIQDPHHLVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWI 365
           FIVVNF+RFV I DP  ++  HLSFLK L+IRGRIYLNEQGINAQ+SGPS DAL Y+EW+
Sbjct: 82  FIVVNFFRFVSIGDPEAVIEKHLSFLKDLNIRGRIYLNEQGINAQYSGPSKDALAYVEWL 141

Query: 366 KEDSRFSDILVQISPSVNGHSF 431
           K D RFSD+LVQ+SP++NGH+F
Sbjct: 142 KGDERFSDLLVQMSPAINGHAF 163


>ref|XP_004159612.1| PREDICTED: rhodanese-like domain-containing protein 8,
           chloroplastic-like [Cucumis sativus]
          Length = 431

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/128 (50%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
 Frame = +3

Query: 60  KWPPIFRIHTRGSKIL----FKTSVCYSFPPSSTKRAYSDHTPSSSFIVVNFYRFVFIQD 227
           KW P   I    + +     F +    +  PS   R    H     F+VVNFY FVFI+D
Sbjct: 40  KWKPTQIIAVSSASLTQSNTFHSVSLSNLGPSEEHRQLLPHISEEDFVVVNFYHFVFIED 99

Query: 228 PHHLVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWIKEDSRFSDILVQIS 407
           P   VS HL F++ LDI GRIYLNEQGINAQ+SGPS  AL Y  W++ED RF DILVQ+S
Sbjct: 100 PQAEVSKHLYFMRDLDIHGRIYLNEQGINAQYSGPSKHALAYANWLREDPRFLDILVQVS 159

Query: 408 PSVNGHSF 431
           P++N H+F
Sbjct: 160 PAINDHAF 167


>ref|XP_004136802.1| PREDICTED: rhodanese-like domain-containing protein 8,
           chloroplastic-like [Cucumis sativus]
          Length = 431

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/128 (50%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
 Frame = +3

Query: 60  KWPPIFRIHTRGSKIL----FKTSVCYSFPPSSTKRAYSDHTPSSSFIVVNFYRFVFIQD 227
           KW P   I    + +     F +    +  PS   R    H     F+VVNFY FVFI+D
Sbjct: 40  KWKPTQIIAVSSASLTQSNTFHSVSLSNLGPSEEHRQLLPHISEEDFVVVNFYHFVFIED 99

Query: 228 PHHLVSTHLSFLKGLDIRGRIYLNEQGINAQFSGPSVDALMYLEWIKEDSRFSDILVQIS 407
           P   VS HL F++ LDI GRIYLNEQGINAQ+SGPS  AL Y  W++ED RF DILVQ+S
Sbjct: 100 PQAEVSKHLYFMRDLDIHGRIYLNEQGINAQYSGPSKHALAYANWLREDPRFLDILVQVS 159

Query: 408 PSVNGHSF 431
           P++N H+F
Sbjct: 160 PAINDHAF 167


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