BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035672
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...    74   9e-12
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]    74   9e-12
emb|CBI28088.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...    70   1e-10

>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
           predicted protein [Populus trichocarpa]
          Length = 1107

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 59/137 (43%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
 Frame = -3

Query: 361 SMEITGTDTPPEKLPRQILPSTNGDNYNNTRPSLFSSILHKFAKVADTQIPNERNQEEGG 182
           S+EI GTDTPPEK+PRQILP    +N      SLFSSI+HKF KV D + PN RNQ    
Sbjct: 56  SIEIRGTDTPPEKVPRQILPVNIKENEEAKVASLFSSIMHKFVKVDDREKPNGRNQVHS- 114

Query: 181 GPSRICTTSNTFGI----------------GQGWSKLGHVGEVS-----DFSDILGPITP 65
             + +C+TS TF I                  G+S  G V + S       +D+ GP TP
Sbjct: 115 --ANVCSTSVTFTIPKELPQHGMDTLYSEKDNGFSSSGMVDQTSVLNIESVNDVPGPHTP 172

Query: 64  LTQKKPLVSRFKRNNED 14
               +PLV R KR  ED
Sbjct: 173 --GMRPLVPRLKRILED 187


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 56/142 (39%), Positives = 75/142 (52%), Gaps = 25/142 (17%)
 Frame = -3

Query: 361 SMEITGTDTPPEKLPRQILPSTNGDNYN----NTRPSLFSSILHKFAKVADTQIPNERNQ 194
           SMEITGTDTPPEK+PRQ++P++   N +    ++  SLFSSI+HKF KV + +   ER +
Sbjct: 62  SMEITGTDTPPEKVPRQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCER-K 120

Query: 193 EEGGGPSRICTTS------------NTF---GIGQGWSKLGHVGEV------SDFSDILG 77
           E   G S  C+TS            N F       G++    V +V      S   DI+G
Sbjct: 121 EMHSGSSNTCSTSVNSDCEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDIIG 180

Query: 76  PITPLTQKKPLVSRFKRNNEDD 11
           P TP    +P V R KR  ED+
Sbjct: 181 PETP--GMRPFVPRLKRIQEDN 200


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 56/142 (39%), Positives = 75/142 (52%), Gaps = 25/142 (17%)
 Frame = -3

Query: 361 SMEITGTDTPPEKLPRQILPSTNGDNYN----NTRPSLFSSILHKFAKVADTQIPNERNQ 194
           SMEITGTDTPPEK+PRQ++P++   N +    ++  SLFSSI+HKF KV + +   ER +
Sbjct: 62  SMEITGTDTPPEKVPRQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCER-K 120

Query: 193 EEGGGPSRICTTS------------NTF---GIGQGWSKLGHVGEV------SDFSDILG 77
           E   G S  C+TS            N F       G++    V +V      S   DI+G
Sbjct: 121 EMHSGSSNTCSTSVNSDCEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDIIG 180

Query: 76  PITPLTQKKPLVSRFKRNNEDD 11
           P TP    +P V R KR  ED+
Sbjct: 181 PETP--GMRPFVPRLKRIQEDN 200


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 56/143 (39%), Positives = 75/143 (52%), Gaps = 26/143 (18%)
 Frame = -3

Query: 361 SMEITGTDTPPEKLPRQILPSTNGDNYN----NTRPSLFSSILHKFAKVADTQIPNERN- 197
           SMEITGTDTPPEK+PRQ++P++   N +    ++  SLFSSI+HKF KV + +   ER  
Sbjct: 62  SMEITGTDTPPEKVPRQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCERYL 121

Query: 196 QEEGGGPSRICTTS------------NTF---GIGQGWSKLGHVGEV------SDFSDIL 80
           +E   G S  C+TS            N F       G++    V +V      S   DI+
Sbjct: 122 KEMHSGSSNTCSTSVNSDCEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDII 181

Query: 79  GPITPLTQKKPLVSRFKRNNEDD 11
           GP TP    +P V R KR  ED+
Sbjct: 182 GPETP--GMRPFVPRLKRIQEDN 202


>ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
           MSH7-like [Cucumis sativus]
          Length = 1095

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 55/142 (38%), Positives = 69/142 (48%), Gaps = 27/142 (19%)
 Frame = -3

Query: 361 SMEITGTDTPPEKLPRQILPSTNGDNYNNTRPSLFSSILHKFAKVADTQIPNERNQ---- 194
           S+EI GTDTPPEK+PRQILP        N   SLFSSI+HKF +V D +  NER++    
Sbjct: 56  SLEIRGTDTPPEKVPRQILPVIE----KNRGSSLFSSIMHKFVRVDDKRKANERDEVQKD 111

Query: 193 ----EEGGGPSRICTTSNTFGIGQGWSKL----------------GHVGEVSDF---SDI 83
               E G    ++ + S        +SKL                GH G V +     DI
Sbjct: 112 SSQNEVGKDSPQLPSISGKVNDPTEFSKLDVASRRHGKFDVANLNGHRGPVLNIESNEDI 171

Query: 82  LGPITPLTQKKPLVSRFKRNNE 17
            GP TP    +P VSR KR+ E
Sbjct: 172 AGPETP--GMRPSVSRLKRSQE 191