BLASTX nr result

ID: Coptis21_contig00035669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035669
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516581.1| Dehydration-responsive protein RD22 precurso...   117   3e-28
gb|ABK95182.1| unknown [Populus trichocarpa]                          115   2e-27
gb|ACD49738.1| BURP domain-containing protein [Solanum tuberosum]     113   5e-27
ref|XP_002324250.1| predicted protein [Populus trichocarpa] gi|2...   114   5e-27
gb|ACP40550.1| rd22-b [Vitis vinifera]                                124   2e-26

>ref|XP_002516581.1| Dehydration-responsive protein RD22 precursor, putative [Ricinus
           communis] gi|223544401|gb|EEF45922.1|
           Dehydration-responsive protein RD22 precursor, putative
           [Ricinus communis]
          Length = 379

 Score =  117 bits (293), Expect(2) = 3e-28
 Identities = 66/118 (55%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
 Frame = +3

Query: 249 YQYQGPEDQLTRD--VDLFFLRKTYSSR--MNLYFTRTTTGAAFLPRYVAESIPFSSKNL 416
           Y Y   E QL  D  V LFFL K    R  MNL+FT     A FLPR VA+SIPFSSK L
Sbjct: 151 YNYAATETQLHHDPNVALFFLEKDMYPRKTMNLHFTENPNTAMFLPRQVAKSIPFSSKEL 210

Query: 417 VKVMNQFSVDTESAVADGMRQTLKLCESPDLDGEIKLCATSLETMVDFSTLMLGKKVQ 590
            ++ NQFSV   S  A+ M+ T+K CE+P ++GE KLCATSLE+M+DFST +LGK VQ
Sbjct: 211 PEIYNQFSVKPGSMEAELMKNTIKECEAPGIEGEEKLCATSLESMIDFSTSVLGKNVQ 268



 Score = 33.9 bits (76), Expect(2) = 3e-28
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
 Frame = +1

Query: 577 GKKFS*CSTEMGKEETSKQRYTVSQESQRYMGGET-------YADAVFYCHGTHS 720
           GK     STE+ + +T  Q+YT++  ++   G ++       YA AVFYCH T +
Sbjct: 264 GKNVQAISTEV-ENQTQMQKYTITAGAKEMAGDKSVVCHKQNYAYAVFYCHATQT 317


>gb|ABK95182.1| unknown [Populus trichocarpa]
          Length = 421

 Score =  115 bits (287), Expect(2) = 2e-27
 Identities = 68/136 (50%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
 Frame = +3

Query: 201 GKPL--RKHPAGPPLDNYYQYQGPEDQLTRD--VDLFFLRKTY--SSRMNLYFTRTTTGA 362
           GKP+    HP   P    Y+Y   E QL  D  V LFFL K       MNL FT  T  A
Sbjct: 178 GKPVIVGVHPGPSPF--LYKYAATETQLHHDPTVALFFLEKDMHPGKMMNLQFTENTNTA 235

Query: 363 AFLPRYVAESIPFSSKNLVKVMNQFSVDTESAVADGMRQTLKLCESPDLDGEIKLCATSL 542
            FLPR V +SIPFSS NL ++ ++FSV   S  A+ M++T+K CE+P ++GE K CATSL
Sbjct: 236 TFLPRQVTDSIPFSSNNLPEIYSEFSVKPGSTEAEVMKETIKECENPGIEGEEKECATSL 295

Query: 543 ETMVDFSTLMLGKKVQ 590
           E+M+DFST  LGK VQ
Sbjct: 296 ESMIDFSTSKLGKNVQ 311



 Score = 33.5 bits (75), Expect(2) = 2e-27
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
 Frame = +1

Query: 577 GKKFS*CSTEMGKEETSKQRYTVSQESQRYMGGET-------YADAVFYCHGTHS 720
           GK     STE+  E T  Q+YT+    ++  G ++       YA AVFYCH T +
Sbjct: 307 GKNVQAISTEV--ESTQMQKYTIKTGVKKMAGDKSVVCHKQNYAYAVFYCHATQT 359


>gb|ACD49738.1| BURP domain-containing protein [Solanum tuberosum]
          Length = 365

 Score =  113 bits (282), Expect(2) = 5e-27
 Identities = 61/118 (51%), Positives = 78/118 (66%), Gaps = 4/118 (3%)
 Frame = +3

Query: 249 YQYQGPEDQLTRD--VDLFFLRKTY--SSRMNLYFTRTTTGAAFLPRYVAESIPFSSKNL 416
           Y Y   +DQL  +  V LFFL K     S MNL F +   GA+FLPR  A+SIPFSS+ +
Sbjct: 132 YNYAAKDDQLNDNPNVALFFLEKDLHQGSNMNLQFVKNANGASFLPREEADSIPFSSEKM 191

Query: 417 VKVMNQFSVDTESAVADGMRQTLKLCESPDLDGEIKLCATSLETMVDFSTLMLGKKVQ 590
            +++NQFSVD +S     M+QT++ CE P + GE K CATSLE+MVDF+T  LG KVQ
Sbjct: 192 PEILNQFSVDPDSEEGQIMKQTVQECEEPGIKGEEKYCATSLESMVDFTTSKLGNKVQ 249



 Score = 34.3 bits (77), Expect(2) = 5e-27
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
 Frame = +1

Query: 577 GKKFS*CSTEMGKEETSKQRYTV----------SQESQRYMGGETYADAVFYCHGTHS 720
           G K    STE  KE T  Q+YT+          + +       + YA AVFYCH T +
Sbjct: 245 GNKVQPLSTETQKENTQMQKYTILGAKKMGNNNNNDKSVVCHKQNYAYAVFYCHKTET 302


>ref|XP_002324250.1| predicted protein [Populus trichocarpa] gi|222865684|gb|EEF02815.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  114 bits (284), Expect(2) = 5e-27
 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 4/118 (3%)
 Frame = +3

Query: 249 YQYQGPEDQLTRD--VDLFFLRKTY--SSRMNLYFTRTTTGAAFLPRYVAESIPFSSKNL 416
           Y+Y   E QL  D  V LFFL K       MNL FT  T  A FLPR VA+SIPFSS NL
Sbjct: 105 YKYAATETQLHHDPTVALFFLEKDMHPGKMMNLQFTENTNTATFLPRQVADSIPFSSNNL 164

Query: 417 VKVMNQFSVDTESAVADGMRQTLKLCESPDLDGEIKLCATSLETMVDFSTLMLGKKVQ 590
            ++ ++FSV   S  A+ M++T+K CE+P ++GE K CATSLE+M+DFST  LGK VQ
Sbjct: 165 PEIYSEFSVKPGSTEAEVMKETIKECENPGIEGEEKECATSLESMIDFSTSKLGKNVQ 222



 Score = 33.5 bits (75), Expect(2) = 5e-27
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
 Frame = +1

Query: 577 GKKFS*CSTEMGKEETSKQRYTVSQESQRYMGGET-------YADAVFYCHGTHS 720
           GK     STE+  E T  Q+YT+    ++  G ++       YA AVFYCH T +
Sbjct: 218 GKNVQAISTEV--ESTQMQKYTIKTGVKKMAGDKSVVCHKQNYAYAVFYCHATQT 270


>gb|ACP40550.1| rd22-b [Vitis vinifera]
          Length = 327

 Score =  124 bits (311), Expect = 2e-26
 Identities = 72/155 (46%), Positives = 98/155 (63%), Gaps = 4/155 (2%)
 Frame = +3

Query: 219 HPAGPPLDNYYQYQGPEDQLTRD--VDLFFLRKTY--SSRMNLYFTRTTTGAAFLPRYVA 386
           HP   P    Y+Y   +DQL  D  V LFFL K    S ++NL+FT+TT+GA  LPR+VA
Sbjct: 90  HPWHEPF--IYRYAASQDQLRDDPNVALFFLEKDLHPSKKLNLHFTKTTSGAKLLPRHVA 147

Query: 387 ESIPFSSKNLVKVMNQFSVDTESAVADGMRQTLKLCESPDLDGEIKLCATSLETMVDFST 566
           E+IPFSS  L  ++N+FSV+  SA A  M++T++ CE P ++GE K CATSLE MVD+ST
Sbjct: 148 ETIPFSSNELSDILNRFSVEPGSAEALEMKKTIEECEVPAMEGEDKYCATSLEAMVDYST 207

Query: 567 LMLGKKVQLMFH*DGQRRDIKATLYCFPRVTKIYG 671
             LGK V++M    G+    +      P +TK+ G
Sbjct: 208 TKLGKNVKVMATEVGKEESPQQEFTISPGLTKMVG 242


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