BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035619
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512931.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
ref|XP_003617985.1| F-box/kelch-repeat protein [Medicago truncat...    63   3e-08
gb|ADE43182.1| SFBBbeta protein [Pyrus pyrifolia]                      62   5e-08
gb|ADE43173.1| SFBBbeta protein, partial [Pyrus communis]              62   5e-08
gb|ADE43165.1| SFBBbeta protein [Pyrus communis] gi|293337847|gb...    62   5e-08

>ref|XP_002512931.1| conserved hypothetical protein [Ricinus communis]
           gi|223547942|gb|EEF49434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
 Frame = -1

Query: 307 VSLWNPATKQLRILPEAQHHCPDPPNGRIS----LGFGFDVKTNDYKVVRVIMGFMG--C 146
           V LWNP T +++I+P  Q +   PPN   S    + FGFD KTNDYK++++ + +     
Sbjct: 141 VILWNPLTSEIKIIP--QSNASRPPNTVHSSLQLVEFGFDRKTNDYKILKMFLVYPNDLQ 198

Query: 145 GDFEFCLVQVYSLSTNTWRIVDTVWPFPCGFIVSHPNAPLQNGTYCW 5
           GD+    V++YSL   +WR VD V PF         +    NG + W
Sbjct: 199 GDY---FVEIYSLRNESWRTVDVVVPFMLSCFDDRCHYTGANGQFHW 242


>ref|XP_003617985.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355519320|gb|AET00944.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 428

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
 Frame = -1

Query: 304 SLWNPATKQLRILPEAQHHC-PDPPNGR----------ISLGFGFDVKTNDYKVVRVIM- 161
           +LWNP T++ +++P + +   P   NG            + GFG+D +T+DYK++  +M 
Sbjct: 158 ALWNPTTEEFKVIPHSPNRIQPFAANGSHDVINFYSFSYACGFGYDSRTDDYKMINYVMF 217

Query: 160 ---------GFMGCGDFEFCLVQVYSLSTNTWRIVDTVWPFPCGFIVSHPNAPLQNGTYC 8
                    G+   GD      ++YSL +N+WR +D V P P     S  +    NG   
Sbjct: 218 LAPPSYECIGYKPLGDTPEPFWKIYSLRSNSWRKLDVVMPLPIKHFSSTRDKVYMNGMCH 277

Query: 7   WL 2
           WL
Sbjct: 278 WL 279


>gb|ADE43182.1| SFBBbeta protein [Pyrus pyrifolia]
          Length = 396

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
 Frame = -1

Query: 301 LWNPATKQLRILPEAQHHCPDPPNGRISL-------GFGFDVKTNDYKVVRVIMGFMGCG 143
           L+NPAT++L+ LP++    P PP G+  L       GFG+D K N+YKVV++I       
Sbjct: 138 LYNPATRELKQLPDSCLLLPSPPEGKFELESTFQGMGFGYDSKANEYKVVKIIENCEYSD 197

Query: 142 D---FEFCL-----VQVYSLSTNTWRIVD 80
           D   F  C+      +VY  +TN+WR+++
Sbjct: 198 DMRTFSHCIALPHTTEVYVTTTNSWRVIE 226


>gb|ADE43173.1| SFBBbeta protein, partial [Pyrus communis]
          Length = 380

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
 Frame = -1

Query: 301 LWNPATKQLRILPEAQHHCPDPPNGRISL-------GFGFDVKTNDYKVVRVIMGFMGCG 143
           L+NPAT++L+ LP++    P PP G+  L       GFG+D K N+YKVV++I       
Sbjct: 138 LYNPATRELKQLPDSCLLLPSPPEGKFELESTFQGMGFGYDSKANEYKVVKIIENCEYSD 197

Query: 142 D---FEFCL-----VQVYSLSTNTWRIVD 80
           D   F  C+      +VY  +TN+WR+++
Sbjct: 198 DMRTFSHCIALPHTTEVYVTTTNSWRVIE 226


>gb|ADE43165.1| SFBBbeta protein [Pyrus communis] gi|293337847|gb|ADE43167.1|
           SFBBbeta protein [Pyrus communis]
          Length = 396

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
 Frame = -1

Query: 301 LWNPATKQLRILPEAQHHCPDPPNGRISL-------GFGFDVKTNDYKVVRVIMGFMGCG 143
           L+NPAT++L+ LP++    P PP G+  L       GFG+D K N+YKVV++I       
Sbjct: 138 LYNPATRELKQLPDSCLLLPSPPEGKFELESTFQGMGFGYDSKANEYKVVKIIENCEYSD 197

Query: 142 D---FEFCL-----VQVYSLSTNTWRIVD 80
           D   F  C+      +VY  +TN+WR+++
Sbjct: 198 DMRTFSHCIALPHTTEVYVTTTNSWRVIE 226