BLASTX nr result

ID: Coptis21_contig00035613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035613
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877532.1| hypothetical protein ARALYDRAFT_905922 [Arab...   124   1e-26
ref|XP_002510370.1| deoxyuridine 5'-triphosphate nucleotidohydro...   122   4e-26
ref|NP_001233870.1| deoxyuridine 5'-triphosphate nucleotidohydro...   122   4e-26
pdb|2P9O|A Chain A, Structure Of Dutpase From Arabidopsis Thalia...   121   7e-26
ref|XP_002303134.1| predicted protein [Populus trichocarpa] gi|1...   121   7e-26

>ref|XP_002877532.1| hypothetical protein ARALYDRAFT_905922 [Arabidopsis lyrata subsp.
           lyrata] gi|297323370|gb|EFH53791.1| hypothetical protein
           ARALYDRAFT_905922 [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/66 (89%), Positives = 66/66 (100%)
 Frame = -1

Query: 199 AILPSRGSSLSAGYDLSSAVETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSI 20
           A+LP+RGSSLSAGYDLSSAV++KVPARGKAL+PTDLSIA+PEGTYARIAPRSGLAWKHSI
Sbjct: 50  AVLPTRGSSLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSI 109

Query: 19  NVGAGV 2
           +VGAGV
Sbjct: 110 DVGAGV 115


>ref|XP_002510370.1| deoxyuridine 5'-triphosphate nucleotidohydrolase, putative [Ricinus
           communis] gi|223551071|gb|EEF52557.1| deoxyuridine
           5'-triphosphate nucleotidohydrolase, putative [Ricinus
           communis]
          Length = 207

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/66 (89%), Positives = 64/66 (96%)
 Frame = -1

Query: 199 AILPSRGSSLSAGYDLSSAVETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSI 20
           AILP+RGS LSAGYDLSSA +TKVPARGKAL+PTDLSIA+PEGTYARIAPRSGLAWKHSI
Sbjct: 44  AILPTRGSLLSAGYDLSSATDTKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSI 103

Query: 19  NVGAGV 2
           +VGAGV
Sbjct: 104 DVGAGV 109


>ref|NP_001233870.1| deoxyuridine 5'-triphosphate nucleotidohydrolase [Solanum
           lycopersicum] gi|416922|sp|P32518.1|DUT_SOLLC RecName:
           Full=Deoxyuridine 5'-triphosphate nucleotidohydrolase;
           Short=dUTPase; AltName: Full=P18; AltName: Full=dUTP
           pyrophosphatase gi|251897|gb|AAB22611.1| deoxyuridine
           triphosphatase [Solanum lycopersicum]
          Length = 169

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/67 (88%), Positives = 65/67 (97%)
 Frame = -1

Query: 202 NAILPSRGSSLSAGYDLSSAVETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHS 23
           NA+LPSR SSL+AGYDLSSA ETKVPARGKALVPTDLSIA+P+GTYARIAPRSGLAWK+S
Sbjct: 40  NAVLPSRASSLAAGYDLSSAAETKVPARGKALVPTDLSIAVPQGTYARIAPRSGLAWKYS 99

Query: 22  INVGAGV 2
           I+VGAGV
Sbjct: 100 IDVGAGV 106


>pdb|2P9O|A Chain A, Structure Of Dutpase From Arabidopsis Thaliana
           gi|167013262|pdb|2P9O|B Chain B, Structure Of Dutpase
           From Arabidopsis Thaliana gi|167013263|pdb|2P9O|C Chain
           C, Structure Of Dutpase From Arabidopsis Thaliana
           gi|167744878|pdb|2PC5|A Chain A, Native Crystal
           Structure Analysis On Arabidopsis Dutpase
           gi|167744879|pdb|2PC5|B Chain B, Native Crystal
           Structure Analysis On Arabidopsis Dutpase
           gi|167744880|pdb|2PC5|C Chain C, Native Crystal
           Structure Analysis On Arabidopsis Dutpase
          Length = 169

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/66 (86%), Positives = 65/66 (98%)
 Frame = -1

Query: 199 AILPSRGSSLSAGYDLSSAVETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSI 20
           A++P+RGS LSAGYDLSSAV++KVPARGKAL+PTDLSIA+PEGTYARIAPRSGLAWKHSI
Sbjct: 41  AVIPTRGSPLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSI 100

Query: 19  NVGAGV 2
           +VGAGV
Sbjct: 101 DVGAGV 106


>ref|XP_002303134.1| predicted protein [Populus trichocarpa] gi|118485217|gb|ABK94469.1|
           unknown [Populus trichocarpa]
           gi|222844860|gb|EEE82407.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = -1

Query: 202 NAILPSRGSSLSAGYDLSSAVETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHS 23
           NA+LPSRGS LSAGYDLSSA + KVPARGKAL+PTDLSIAIPEGTYARIAPRSGL WKHS
Sbjct: 41  NAVLPSRGSPLSAGYDLSSASKAKVPARGKALIPTDLSIAIPEGTYARIAPRSGLTWKHS 100

Query: 22  INVGAGV 2
           I+VGAGV
Sbjct: 101 IDVGAGV 107