BLASTX nr result

ID: Coptis21_contig00035581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035581
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64449.1| hypothetical protein VITISV_008912 [Vitis vinifera]    82   6e-14
emb|CAN60067.1| hypothetical protein VITISV_012399 [Vitis vinifera]    75   5e-12
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    75   7e-12
emb|CAN83329.1| hypothetical protein VITISV_034016 [Vitis vinifera]    74   1e-11
emb|CAN61757.1| hypothetical protein VITISV_030741 [Vitis vinifera]    73   3e-11

>emb|CAN64449.1| hypothetical protein VITISV_008912 [Vitis vinifera]
          Length = 496

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/133 (33%), Positives = 66/133 (49%)
 Frame = -2

Query: 461 WTFSNSMQQLLTRLGIRIEELQEPLPHQQDKRLWKHTTSGQFTVKSACEAIRDRNVKPPW 282
           W      + LLT  G R+      +P  +D+ +WK T++G F+VKS    +  R   P  
Sbjct: 277 WEVEEVERLLLTIRGARL------IPLMEDRMMWKVTSNGIFSVKSLYNDLSSRRAGPFP 330

Query: 281 HKFLWSAKVHPRISSIGWKILQKGLYMDDVLTSKKVALASRCCFCKKEAESFDHLFFNCS 102
           H  +WS  V  ++S   WK     +   D L  +  ALA+RC  C +E ES DH+  +CS
Sbjct: 331 HGLIWSPSVPSKVSFFAWKASWGKVLTMDQLKKRGWALANRCFLCCEEEESIDHILIHCS 390

Query: 101 LTKRFWELVTSWF 63
             +  WEL+ + F
Sbjct: 391 RARALWELLFALF 403


>emb|CAN60067.1| hypothetical protein VITISV_012399 [Vitis vinifera]
          Length = 1707

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/133 (30%), Positives = 64/133 (48%)
 Frame = -2

Query: 461  WTFSNSMQQLLTRLGIRIEELQEPLPHQQDKRLWKHTTSGQFTVKSACEAIRDRNVKPPW 282
            W      + LLT  G R+  L E      D+ +WK T++G F+VKS    +  R      
Sbjct: 1488 WEVEEVERLLLTIRGARLSPLME------DRMMWKVTSNGSFSVKSLYNDLSSRRAGLFP 1541

Query: 281  HKFLWSAKVHPRISSIGWKILQKGLYMDDVLTSKKVALASRCCFCKKEAESFDHLFFNCS 102
            H  +W+  V  ++S   W+     +   D L  +  A+A+RC  C +E ES DH+  +CS
Sbjct: 1542 HGLIWNPSVPSKVSFFAWEASWGKVLTMDQLKKRGWAVANRCFLCCEEEESIDHILIHCS 1601

Query: 101  LTKRFWELVTSWF 63
              +  WEL+ + F
Sbjct: 1602 KVRALWELLFALF 1614


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/92 (36%), Positives = 49/92 (53%)
 Frame = -2

Query: 356 HTTSGQFTVKSACEAIRDRNVKPPWHKFLWSAKVHPRISSIGWKILQKGLYMDDVLTSKK 177
           H + G  T + A + I +      W KFLW++ + P  S I W++L   L  D+ L  + 
Sbjct: 12  HISFGDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRG 71

Query: 176 VALASRCCFCKKEAESFDHLFFNCSLTKRFWE 81
             + S CCFC K AES  H+FF C +T R W+
Sbjct: 72  CLIVSICCFCMKSAESSQHIFFECHVTSRLWD 103


>emb|CAN83329.1| hypothetical protein VITISV_034016 [Vitis vinifera]
          Length = 329

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/133 (30%), Positives = 64/133 (48%)
 Frame = -2

Query: 461 WTFSNSMQQLLTRLGIRIEELQEPLPHQQDKRLWKHTTSGQFTVKSACEAIRDRNVKPPW 282
           W      + LLT  G R+      +P  +D+ +WK T++G F+VKS    +  R      
Sbjct: 144 WEVEEVERLLLTIRGARL------IPLMEDRMMWKVTSNGIFSVKSLYNDLSSRRAGLFP 197

Query: 281 HKFLWSAKVHPRISSIGWKILQKGLYMDDVLTSKKVALASRCCFCKKEAESFDHLFFNCS 102
           H  +WS  V  ++S   W+     +   D L  +  ALA+RC  C +E ES DH+  +CS
Sbjct: 198 HGLIWSPSVPSKVSFFTWEASWGKVLTMDQLKKRGWALANRCFLCCEEEESIDHILIHCS 257

Query: 101 LTKRFWELVTSWF 63
             +  WE + + F
Sbjct: 258 RARALWEFLFALF 270


>emb|CAN61757.1| hypothetical protein VITISV_030741 [Vitis vinifera]
          Length = 1306

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
 Frame = -2

Query: 386  PHQQDKRLWKHTTSGQFTVKSACEAIRDRNVKPPWH--KFLWSAKVHPRISSIGWKILQK 213
            P   DKR W  + SG FTVKS   A+   +  PP    KF+W+++V  ++ S  W +  K
Sbjct: 1098 PSVPDKRSWSISPSGLFTVKSFFLALSQHSESPPVFPTKFVWNSQVPFKVKSFVWLVAHK 1157

Query: 212  GLYMDDVLTSKKV--ALASRCC-FCKKEAESFDHLFFNCSLTKRFW 84
             L  +D+L  ++   AL+   C  C K  E+ DHLF +CSLTK  W
Sbjct: 1158 KLNTNDLLQLRRPHKALSPNICKLCMKHGETVDHLFLHCSLTKGLW 1203


Top