BLASTX nr result

ID: Coptis21_contig00035563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035563
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
emb|CBI23162.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
emb|CAN79717.1| hypothetical protein VITISV_027522 [Vitis vinifera]   170   1e-40
emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]   169   2e-40

>ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|222857522|gb|EEE95069.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/112 (73%), Positives = 95/112 (84%)
 Frame = +1

Query: 4   EKTGYNASDIRVANSLIDAYAKCGCIENAFKVFEDISTERRNLVTWTSIISGFAMHGMAK 183
           EK G+NA DIRVANS+ID Y+KCGCI +AFK FEDIS ER+NLV+WTSIISGFAMHGM K
Sbjct: 117 EKRGFNAFDIRVANSIIDCYSKCGCIASAFKFFEDISVERKNLVSWTSIISGFAMHGMWK 176

Query: 184 EALEQFEEMEKEGLKANQITFLSVLNACSHGGLVNEGLEFFRKMINGCQIMP 339
           EA+E FE MEK GLK N++TFLSVLNACSHGGLV+EGL  F KM+N   ++P
Sbjct: 177 EAVEYFERMEKAGLKPNRVTFLSVLNACSHGGLVDEGLRCFYKMVNEHGVLP 228


>emb|CBI23162.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/113 (72%), Positives = 94/113 (83%)
 Frame = +1

Query: 1   GEKTGYNASDIRVANSLIDAYAKCGCIENAFKVFEDISTERRNLVTWTSIISGFAMHGMA 180
           GEK+G NASDIR+  SL+D YAKCGCIE+A  VF +I+ + RNLV+WTSIIS FAMHGMA
Sbjct: 249 GEKSGLNASDIRIRTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMA 308

Query: 181 KEALEQFEEMEKEGLKANQITFLSVLNACSHGGLVNEGLEFFRKMINGCQIMP 339
           KEALE FE M+KE LK N+ITFLSVLNACSHGGLV EGL+ F KM+N CQI P
Sbjct: 309 KEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISP 361


>ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
           mitochondrial-like [Vitis vinifera]
          Length = 470

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/113 (72%), Positives = 94/113 (83%)
 Frame = +1

Query: 1   GEKTGYNASDIRVANSLIDAYAKCGCIENAFKVFEDISTERRNLVTWTSIISGFAMHGMA 180
           GEK+G NASDIR+  SL+D YAKCGCIE+A  VF +I+ + RNLV+WTSIIS FAMHGMA
Sbjct: 249 GEKSGLNASDIRIRTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMA 308

Query: 181 KEALEQFEEMEKEGLKANQITFLSVLNACSHGGLVNEGLEFFRKMINGCQIMP 339
           KEALE FE M+KE LK N+ITFLSVLNACSHGGLV EGL+ F KM+N CQI P
Sbjct: 309 KEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISP 361


>emb|CAN79717.1| hypothetical protein VITISV_027522 [Vitis vinifera]
          Length = 610

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/113 (72%), Positives = 94/113 (83%)
 Frame = +1

Query: 1   GEKTGYNASDIRVANSLIDAYAKCGCIENAFKVFEDISTERRNLVTWTSIISGFAMHGMA 180
           GEK+G NASDIR+  SL+D YAKCGCIE+A  VF +I+ + RNLV+WTSIIS FAMHGMA
Sbjct: 249 GEKSGLNASDIRIRTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMA 308

Query: 181 KEALEQFEEMEKEGLKANQITFLSVLNACSHGGLVNEGLEFFRKMINGCQIMP 339
           KEALE FE M+KE LK N+ITFLSVLNACSHGGLV EGL+ F KM+N CQI P
Sbjct: 309 KEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISP 361


>emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
          Length = 538

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/113 (72%), Positives = 94/113 (83%)
 Frame = +1

Query: 1   GEKTGYNASDIRVANSLIDAYAKCGCIENAFKVFEDISTERRNLVTWTSIISGFAMHGMA 180
           GEK+G NASDIR+  SL+D YAKCGCIE+A +VF +I  + RNLV+WTSIIS FAMHGMA
Sbjct: 249 GEKSGLNASDIRIRTSLLDTYAKCGCIESASRVFGEIDAKSRNLVSWTSIISAFAMHGMA 308

Query: 181 KEALEQFEEMEKEGLKANQITFLSVLNACSHGGLVNEGLEFFRKMINGCQIMP 339
           KEALE FE M+KE LK N+ITFLSVLNACSHGGLV EGL+FF KM+N  QI P
Sbjct: 309 KEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKFFTKMVNKYQISP 361


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