BLASTX nr result

ID: Coptis21_contig00035561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035561
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20223.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002282948.1| PREDICTED: uncharacterized protein LOC100252...   109   2e-22
ref|XP_003634635.1| PREDICTED: uncharacterized protein LOC100264...   108   4e-22
emb|CAN76642.1| hypothetical protein VITISV_042742 [Vitis vinifera]   108   4e-22
gb|AAF69532.1|AC008007_7 F12M16.12 [Arabidopsis thaliana]             106   2e-21

>emb|CBI20223.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = -1

Query: 275 AVFMNNIIGMSVFLGIVYARGLHWDFSAEVLVVLIICLGMGLFTSFCKTFPLWTCFVACL 96
           AV MNN++ +SVFL +VY RGL WDFS+EVLV+LI+C+ MG+F SF  TFPLWT FVA L
Sbjct: 411 AVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILIVCVVMGVFASFRTTFPLWTSFVALL 470

Query: 95  LYFFSLMLLYVLTYIYHWA 39
           LY FSL L+YVL Y+  W+
Sbjct: 471 LYPFSLALVYVLDYVLGWS 489


>ref|XP_002282948.1| PREDICTED: uncharacterized protein LOC100252144 [Vitis vinifera]
          Length = 579

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = -1

Query: 275 AVFMNNIIGMSVFLGIVYARGLHWDFSAEVLVVLIICLGMGLFTSFCKTFPLWTCFVACL 96
           AV MNN++ +SVFL +VY RGL WDFS+EVLV+LI+C+ MG+F SF  TFPLWT FVA L
Sbjct: 501 AVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILIVCVVMGVFASFRTTFPLWTSFVALL 560

Query: 95  LYFFSLMLLYVLTYIYHWA 39
           LY FSL L+YVL Y+  W+
Sbjct: 561 LYPFSLALVYVLDYVLGWS 579


>ref|XP_003634635.1| PREDICTED: uncharacterized protein LOC100264164 [Vitis vinifera]
           gi|302142926|emb|CBI20221.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = -1

Query: 275 AVFMNNIIGMSVFLGIVYARGLHWDFSAEVLVVLIICLGMGLFTSFCKTFPLWTCFVACL 96
           AV MNN++ +SVFL +VY RGL WDFS+EVLV++I+C+ MG+F SF  TFPLWT FVA L
Sbjct: 502 AVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVIVIVCVVMGVFASFRTTFPLWTSFVALL 561

Query: 95  LYFFSLMLLYVLTYIYHWA 39
           LY FSL L+YVL Y+  W+
Sbjct: 562 LYPFSLALVYVLDYVLGWS 580


>emb|CAN76642.1| hypothetical protein VITISV_042742 [Vitis vinifera]
          Length = 152

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = -1

Query: 275 AVFMNNIIGMSVFLGIVYARGLHWDFSAEVLVVLIICLGMGLFTSFCKTFPLWTCFVACL 96
           AV MNN++ +SVFL +VY RGL WDFS+EVLV++I+C+ MG+F SF  TFPLWT FVA L
Sbjct: 74  AVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVIVIVCVVMGVFASFRTTFPLWTSFVALL 133

Query: 95  LYFFSLMLLYVLTYIYHWA 39
           LY FSL L+YVL Y+  W+
Sbjct: 134 LYPFSLALVYVLDYVLGWS 152


>gb|AAF69532.1|AC008007_7 F12M16.12 [Arabidopsis thaliana]
          Length = 574

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/78 (64%), Positives = 62/78 (79%)
 Frame = -1

Query: 272 VFMNNIIGMSVFLGIVYARGLHWDFSAEVLVVLIICLGMGLFTSFCKTFPLWTCFVACLL 93
           V MNNI+ +SVFL IVY RGL W+FS+EVLV+LI+CL MG F SF  T+PLWTCF+A LL
Sbjct: 497 VTMNNILCLSVFLAIVYVRGLTWNFSSEVLVILIVCLVMGGFASFRTTYPLWTCFIAYLL 556

Query: 92  YFFSLMLLYVLTYIYHWA 39
           Y FSL L+Y+L Y + W+
Sbjct: 557 YPFSLGLVYILDYWFGWS 574


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