BLASTX nr result

ID: Coptis21_contig00035539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035539
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515384.1| Protein ABC1, mitochondrial precursor, putat...   133   2e-29
ref|XP_002324357.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002263074.2| PREDICTED: uncharacterized protein sll0005-l...   129   3e-28
ref|XP_004138689.1| PREDICTED: uncharacterized protein sll0005-l...   127   7e-28
ref|XP_004167825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   126   2e-27

>ref|XP_002515384.1| Protein ABC1, mitochondrial precursor, putative [Ricinus communis]
           gi|223545328|gb|EEF46833.1| Protein ABC1, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 732

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/124 (52%), Positives = 83/124 (66%)
 Frame = -2

Query: 376 FILSEKGWRVRVYLVQDIIKAADVVLSEKIFPFIFNEKSEVRETPGFEGHAMITRVVKAL 197
           FILSEKGWRVRV+L++D+IK  D  L +++   I +EK E  E    E H+M+ RVV   
Sbjct: 599 FILSEKGWRVRVFLIRDLIKVVDAFLEDEVVGCISDEKYEASEASKSESHSMVMRVVDGF 658

Query: 196 QSLQQAVKLAPGVWVAMLLRLAKKPEFYQFTADIVSAFVSHTGRKIPESTWLCISKLLHK 17
           Q L+QAVKLAP +W  ML+RL  KPE   FT DI+SA   H   K+PE+ W  +SK+LHK
Sbjct: 659 QYLRQAVKLAPEMWTVMLIRLTLKPESRAFTLDIISALTLHLSHKLPENFWNSMSKILHK 718

Query: 16  LETN 5
           LE N
Sbjct: 719 LERN 722


>ref|XP_002324357.1| predicted protein [Populus trichocarpa] gi|222865791|gb|EEF02922.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/124 (53%), Positives = 88/124 (70%)
 Frame = -2

Query: 376 FILSEKGWRVRVYLVQDIIKAADVVLSEKIFPFIFNEKSEVRETPGFEGHAMITRVVKAL 197
           FILSEKG RVRV+L++D+IKAADV L ++    + NEK E RE    E +A  TRV K  
Sbjct: 530 FILSEKGGRVRVFLLRDVIKAADVFLQDEAG--VLNEKPEAREASDSEVNATHTRVAKGF 587

Query: 196 QSLQQAVKLAPGVWVAMLLRLAKKPEFYQFTADIVSAFVSHTGRKIPESTWLCISKLLHK 17
             L+QAVKLAP +W AML+R+A KPE ++F+ DI+SA + H   K+PE+ W+C+S+ LHK
Sbjct: 588 HYLRQAVKLAPELWTAMLIRMALKPEVHRFSFDIISALIMHFSHKLPETFWICMSRHLHK 647

Query: 16  LETN 5
           L  N
Sbjct: 648 LVRN 651


>ref|XP_002263074.2| PREDICTED: uncharacterized protein sll0005-like [Vitis vinifera]
          Length = 860

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/124 (50%), Positives = 83/124 (66%)
 Frame = -2

Query: 376  FILSEKGWRVRVYLVQDIIKAADVVLSEKIFPFIFNEKSEVRETPGFEGHAMITRVVKAL 197
            FILS KG RVRV+L++DII A D+ L +++   IF EK   +     EG A++TRV+   
Sbjct: 731  FILSRKGLRVRVFLIRDIISATDIFLQDEVVACIFYEKLGAKAPSESEGDAVLTRVINGF 790

Query: 196  QSLQQAVKLAPGVWVAMLLRLAKKPEFYQFTADIVSAFVSHTGRKIPESTWLCISKLLHK 17
            Q L+QA+ LAP VW  ML+R++ KPE + F  DI+SA   H   KIPE+ W+CISKLLHK
Sbjct: 791  QYLKQAINLAPEVWTGMLIRMSLKPEVHSFMLDIISALAIHFRHKIPETFWVCISKLLHK 850

Query: 16   LETN 5
            L  N
Sbjct: 851  LVRN 854


>ref|XP_004138689.1| PREDICTED: uncharacterized protein sll0005-like [Cucumis sativus]
          Length = 726

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/122 (50%), Positives = 86/122 (70%)
 Frame = -2

Query: 376 FILSEKGWRVRVYLVQDIIKAADVVLSEKIFPFIFNEKSEVRETPGFEGHAMITRVVKAL 197
           FILS+KG RVRV+L++DII   D+VL +++F    +EK + R     E HAM+ RVV   
Sbjct: 601 FILSKKGSRVRVFLLRDIIATVDIVLQDEVFGCSSDEKRQTRS----EDHAMLERVVHGF 656

Query: 196 QSLQQAVKLAPGVWVAMLLRLAKKPEFYQFTADIVSAFVSHTGRKIPESTWLCISKLLHK 17
           Q L QA+KLAP VW AML+R+A KPE + F+ D++S+ + H G+KIP+  W+CIS+ LH 
Sbjct: 657 QCLCQAIKLAPQVWTAMLIRMALKPEVHSFSLDVISSVMMHFGKKIPDHLWICISRFLHD 716

Query: 16  LE 11
           LE
Sbjct: 717 LE 718


>ref|XP_004167825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           sll0005-like [Cucumis sativus]
          Length = 726

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/122 (50%), Positives = 85/122 (69%)
 Frame = -2

Query: 376 FILSEKGWRVRVYLVQDIIKAADVVLSEKIFPFIFNEKSEVRETPGFEGHAMITRVVKAL 197
           FILS+KG RVRV+L++DII   D+VL +++F    +EK + R     E HAM+ RVV   
Sbjct: 601 FILSKKGSRVRVFLLRDIIATVDIVLQDEVFGCSSDEKRQTRS----EDHAMLERVVHGF 656

Query: 196 QSLQQAVKLAPGVWVAMLLRLAKKPEFYQFTADIVSAFVSHTGRKIPESTWLCISKLLHK 17
           Q L QA+KLAP VW AML+R+A KPE + F+ D++S+ + H G KIP+  W+CIS+ LH 
Sbjct: 657 QCLCQAIKLAPQVWTAMLIRMALKPEVHSFSLDVISSVMMHFGXKIPDHLWICISRFLHD 716

Query: 16  LE 11
           LE
Sbjct: 717 LE 718


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