BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035536
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
emb|CBI39579.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16

>ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
           gi|449490933|ref|XP_004158752.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
          Length = 484

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/63 (68%), Positives = 52/63 (82%)
 Frame = +3

Query: 3   CRVHGHLELAEHAVKKLIDLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMREKCILKVP 182
           CR HG+L+LAE AVK+LI LEPWNSGNYVLLSN+ AE+G+W++VE  R  MREK + K P
Sbjct: 419 CRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAP 478

Query: 183 GQS 191
           GQS
Sbjct: 479 GQS 481


>ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Glycine max]
          Length = 483

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 42/63 (66%), Positives = 52/63 (82%)
 Frame = +3

Query: 3   CRVHGHLELAEHAVKKLIDLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMREKCILKVP 182
           CR +G  E+AE+A K+L+ LEPWNSGNYVLLSN+YAE+G+WD+VEK RV MR   + KVP
Sbjct: 418 CRTYGDREIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVP 477

Query: 183 GQS 191
           GQS
Sbjct: 478 GQS 480


>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/65 (67%), Positives = 51/65 (78%)
 Frame = +3

Query: 3   CRVHGHLELAEHAVKKLIDLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMREKCILKVP 182
           CR HG +ELA  AVK+LIDLEPWNSGNYVLLSN+YAE+ +WD+V   R  MREK + K P
Sbjct: 420 CRTHGDVELAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKTP 479

Query: 183 GQSTI 197
           GQS I
Sbjct: 480 GQSVI 484


>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = +3

Query: 6   RVHGHLELAEHAVKKLIDLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMREKCILKVPG 185
           R  G ++ AE AVK+LI+LEPWNSGNYVLLSN+YAE GKWD+VEK R  M+EK I K PG
Sbjct: 394 RTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPG 453

Query: 186 QSTI 197
           QS +
Sbjct: 454 QSMV 457


>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = +3

Query: 6   RVHGHLELAEHAVKKLIDLEPWNSGNYVLLSNIYAEQGKWDQVEKARVTMREKCILKVPG 185
           R  G ++ AE AVK+LI+LEPWNSGNYVLLSN+YAE GKWD+VEK R  M+EK I K PG
Sbjct: 420 RTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPG 479

Query: 186 QSTI 197
           QS +
Sbjct: 480 QSMV 483