BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035520
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   104   9e-21
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   102   4e-20
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   102   4e-20
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   102   4e-20
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   101   7e-20

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/79 (58%), Positives = 60/79 (75%)
 Frame = -2

Query: 237 KDEVFETFKKWKARVENRTDRKVKTLRSDNGTEYTCGPFQEFCAQQGIARHWTVRGMPQQ 58
           K E F+ FK+WK  +EN+T +K+K LR+DNG E+    F +FC  +GIARH TVR  PQQ
Sbjct: 511 KSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQ 570

Query: 57  NGLAERMNRMLLEKARCLL 1
           NG+AERMN+ LLE+ARC+L
Sbjct: 571 NGVAERMNQTLLERARCML 589


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -2

Query: 237 KDEVFETFKKWKARVENRTDRKVKTLRSDNGTEYTCGPFQEFCAQQGIARHWTVRGMPQQ 58
           KDEVF  FK+WK  VE RT + VKTLR+DNG E+    F EFC ++GI RH TVR  PQQ
Sbjct: 632 KDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQ 691

Query: 57  NGLAERMNRMLLEKARCL 4
           NG+AERMN+ L+++ARC+
Sbjct: 692 NGVAERMNQTLVQRARCM 709


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -2

Query: 237 KDEVFETFKKWKARVENRTDRKVKTLRSDNGTEYTCGPFQEFCAQQGIARHWTVRGMPQQ 58
           KDEVF  FK+WK  VE RT + VKTLR+DNG E+    F EFC ++GI RH TVR  PQQ
Sbjct: 487 KDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQ 546

Query: 57  NGLAERMNRMLLEKARCL 4
           NG+AERMN+ L+++ARC+
Sbjct: 547 NGVAERMNQTLVQRARCM 564


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/78 (60%), Positives = 59/78 (75%)
 Frame = -2

Query: 237  KDEVFETFKKWKARVENRTDRKVKTLRSDNGTEYTCGPFQEFCAQQGIARHWTVRGMPQQ 58
            KDEVF  FK+WK  VE RT + VKTLR+DNG E+    F EFC ++GI RH TVR  PQQ
Sbjct: 845  KDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQ 904

Query: 57   NGLAERMNRMLLEKARCL 4
            NG+AERMN+ L+++ARC+
Sbjct: 905  NGVAERMNQTLVQRARCM 922


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = -2

Query: 237 KDEVFETFKKWKARVENRTDRKVKTLRSDNGTEYTCGPFQEFCAQQGIARHWTVRGMPQQ 58
           K++V E F KWK  VEN+T RK+K LR+DNG EY   PF + C   GI RH+T+R  PQQ
Sbjct: 511 KNDVLEIFLKWKDEVENQTGRKIKVLRTDNGGEYKSDPFLKVCQDCGIIRHFTIRKTPQQ 570

Query: 57  NGLAERMNRMLLEKARCLL 1
           NG++ERMN++L+EK RC+L
Sbjct: 571 NGVSERMNKILVEKVRCML 589