BLASTX nr result

ID: Coptis21_contig00035518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035518
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ric...   131   2e-41
ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-39
emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]   119   1e-37
ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243...   119   1e-37
emb|CBI20080.3| unnamed protein product [Vitis vinifera]              119   1e-37

>ref|XP_002511058.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
           gi|223550173|gb|EEF51660.1| tyrosyl-DNA
           phosphodiesterase, putative [Ricinus communis]
          Length = 1148

 Score =  131 bits (329), Expect(2) = 2e-41
 Identities = 55/73 (75%), Positives = 67/73 (91%)
 Frame = -1

Query: 328 VVSLPELLHPVESLTRMFIATFTCDVLWFLQYCEVPNNLPVTIACHNTERCWSSSPDKRM 149
           VVSLPELLHP+E++ R+FIATFT D+LWFL YCE+P++LPVTIACHNTERCWSS+PDKR+
Sbjct: 445 VVSLPELLHPIENIMRIFIATFTSDILWFLSYCEIPSHLPVTIACHNTERCWSSNPDKRI 504

Query: 148 SAPFENFPNLLVI 110
           S P+ NFPNL V+
Sbjct: 505 SMPYSNFPNLSVV 517



 Score = 62.8 bits (151), Expect(2) = 2e-41
 Identities = 26/34 (76%), Positives = 33/34 (97%)
 Frame = -2

Query: 105 IAFGKDRKKQGIACHHPKLLVLQRDSSIRIVVTS 4
           IAFG DR++QGIACHHPKLLVLQR++SIR+++TS
Sbjct: 525 IAFGNDRRRQGIACHHPKLLVLQRENSIRVIITS 558


>ref|XP_002318192.1| predicted protein [Populus trichocarpa] gi|222858865|gb|EEE96412.1|
           predicted protein [Populus trichocarpa]
          Length = 1131

 Score =  125 bits (314), Expect(2) = 2e-39
 Identities = 53/73 (72%), Positives = 66/73 (90%)
 Frame = -1

Query: 328 VVSLPELLHPVESLTRMFIATFTCDVLWFLQYCEVPNNLPVTIACHNTERCWSSSPDKRM 149
           V+SLPELL+PVES++R+FIATFT D+LWFL +CE+P +LPVTIACHNTERCWSSSPD R 
Sbjct: 443 VISLPELLYPVESISRIFIATFTSDILWFLSHCEIPCHLPVTIACHNTERCWSSSPDNRT 502

Query: 148 SAPFENFPNLLVI 110
           S P+ +FPNL+V+
Sbjct: 503 SVPYSDFPNLVVV 515



 Score = 62.4 bits (150), Expect(2) = 2e-39
 Identities = 26/34 (76%), Positives = 33/34 (97%)
 Frame = -2

Query: 105 IAFGKDRKKQGIACHHPKLLVLQRDSSIRIVVTS 4
           IAFG+DRK++GIACHHPKLLVLQR+ SIR+++TS
Sbjct: 523 IAFGQDRKRRGIACHHPKLLVLQREDSIRVIITS 556


>emb|CAN67540.1| hypothetical protein VITISV_012382 [Vitis vinifera]
          Length = 1423

 Score =  119 bits (297), Expect(2) = 1e-37
 Identities = 50/73 (68%), Positives = 64/73 (87%)
 Frame = -1

Query: 328 VVSLPELLHPVESLTRMFIATFTCDVLWFLQYCEVPNNLPVTIACHNTERCWSSSPDKRM 149
           V+SLPELL PVE+L+R+F+ATFT DVLWFL YC+VP +LPVTIACH+TERCWSSS DKR 
Sbjct: 393 VISLPELLFPVENLSRIFVATFTSDVLWFLSYCKVPGHLPVTIACHHTERCWSSSADKRA 452

Query: 148 SAPFENFPNLLVI 110
             P+ ++PNL+++
Sbjct: 453 YVPYSDYPNLVIV 465



 Score = 62.8 bits (151), Expect(2) = 1e-37
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -2

Query: 105 IAFGKDRKKQGIACHHPKLLVLQRDSSIRIVVTS 4
           IAFG+DRKK G+ACHHPKLLVLQR+ SIRI++TS
Sbjct: 473 IAFGRDRKKLGVACHHPKLLVLQREDSIRIIITS 506


>ref|XP_002283806.2| PREDICTED: uncharacterized protein LOC100243589 [Vitis vinifera]
          Length = 1091

 Score =  119 bits (297), Expect(2) = 1e-37
 Identities = 50/73 (68%), Positives = 64/73 (87%)
 Frame = -1

Query: 328 VVSLPELLHPVESLTRMFIATFTCDVLWFLQYCEVPNNLPVTIACHNTERCWSSSPDKRM 149
           V+SLPELL PVE+L+R+F+ATFT DVLWFL YC+VP +LPVTIACH+TERCWSSS DKR 
Sbjct: 389 VISLPELLFPVENLSRIFVATFTSDVLWFLSYCKVPGHLPVTIACHHTERCWSSSADKRA 448

Query: 148 SAPFENFPNLLVI 110
             P+ ++PNL+++
Sbjct: 449 YVPYSDYPNLVIV 461



 Score = 62.8 bits (151), Expect(2) = 1e-37
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -2

Query: 105 IAFGKDRKKQGIACHHPKLLVLQRDSSIRIVVTS 4
           IAFG+DRKK G+ACHHPKLLVLQR+ SIRI++TS
Sbjct: 469 IAFGRDRKKLGVACHHPKLLVLQREDSIRIIITS 502


>emb|CBI20080.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  119 bits (297), Expect(2) = 1e-37
 Identities = 50/73 (68%), Positives = 64/73 (87%)
 Frame = -1

Query: 328 VVSLPELLHPVESLTRMFIATFTCDVLWFLQYCEVPNNLPVTIACHNTERCWSSSPDKRM 149
           V+SLPELL PVE+L+R+F+ATFT DVLWFL YC+VP +LPVTIACH+TERCWSSS DKR 
Sbjct: 349 VISLPELLFPVENLSRIFVATFTSDVLWFLSYCKVPGHLPVTIACHHTERCWSSSADKRA 408

Query: 148 SAPFENFPNLLVI 110
             P+ ++PNL+++
Sbjct: 409 YVPYSDYPNLVIV 421



 Score = 62.8 bits (151), Expect(2) = 1e-37
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -2

Query: 105 IAFGKDRKKQGIACHHPKLLVLQRDSSIRIVVTS 4
           IAFG+DRKK G+ACHHPKLLVLQR+ SIRI++TS
Sbjct: 429 IAFGRDRKKLGVACHHPKLLVLQREDSIRIIITS 462


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