BLASTX nr result

ID: Coptis21_contig00035515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035515
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS01940.1| putative polyprotein [Oryza sativa Japonica Group]      60   2e-07
emb|CAN78755.1| hypothetical protein VITISV_040529 [Vitis vinifera]    59   3e-07
emb|CAH67763.1| H0124E07.10 [Oryza sativa Indica Group]                59   3e-07
emb|CAE02458.1| OSJNBa0042D13.11 [Oryza sativa Japonica Group]         59   3e-07
emb|CAN73538.1| hypothetical protein VITISV_012619 [Vitis vinifera]    59   4e-07

>gb|AAS01940.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 680

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = -1

Query: 190 IMFVPDDLTKVMLPHDSALMITLRIAGYDVQKILVDCGSSVNILF*KAFTGMGLDESHLK 11
           I F P+D   VM PH   L+I+  IAG++V++ILVD GSS +++F KA+  MGL    L 
Sbjct: 24  ISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAKAYANMGLPTHALT 83

Query: 10  P 8
           P
Sbjct: 84  P 84


>emb|CAN78755.1| hypothetical protein VITISV_040529 [Vitis vinifera]
          Length = 261

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/67 (46%), Positives = 45/67 (67%)
 Frame = -1

Query: 205 SIPGAIMFVPDDLTKVMLPHDSALMITLRIAGYDVQKILVDCGSSVNILF*KAFTGMGLD 26
           S+   I F P +  +VM PH++AL+ TL I+G+DV+++LVD GSS N+L   A+  MGL 
Sbjct: 190 SMDDMITFPPINANRVMQPHENALIPTLGISGFDVRRVLVDPGSSANLLQMSAYRQMGLS 249

Query: 25  ESHLKPP 5
            S L+ P
Sbjct: 250 PSVLENP 256


>emb|CAH67763.1| H0124E07.10 [Oryza sativa Indica Group]
          Length = 1761

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/61 (45%), Positives = 41/61 (67%)
 Frame = -1

Query: 190 IMFVPDDLTKVMLPHDSALMITLRIAGYDVQKILVDCGSSVNILF*KAFTGMGLDESHLK 11
           I F P+D  +VM PH   L+I+  IAG++V++ILVD GSS +++F +A+  MGL    L 
Sbjct: 714 ISFGPEDAEEVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 773

Query: 10  P 8
           P
Sbjct: 774 P 774


>emb|CAE02458.1| OSJNBa0042D13.11 [Oryza sativa Japonica Group]
          Length = 992

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/61 (45%), Positives = 41/61 (67%)
 Frame = -1

Query: 190 IMFVPDDLTKVMLPHDSALMITLRIAGYDVQKILVDCGSSVNILF*KAFTGMGLDESHLK 11
           I F P+D  +VM PH   L+I+  IAG++V++ILVD GSS +++F +A+  MGL    L 
Sbjct: 135 ISFGPEDAEEVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPTQALT 194

Query: 10  P 8
           P
Sbjct: 195 P 195


>emb|CAN73538.1| hypothetical protein VITISV_012619 [Vitis vinifera]
          Length = 225

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = -1

Query: 202 IPGAIMFVPDDLTKVMLPHDSALMITLRIAGYDVQKILVDCGSSVNILF*KAFTGMGLDE 23
           I G I F P D  +V+LPH+ AL++TL + G+DV KIL+D G+S ++L   A+  MG   
Sbjct: 10  IDGPITFPPIDSNRVILPHEDALVLTLGVGGFDVHKILIDLGNSTDLLQMSAYRQMGYSL 69

Query: 22  SHLK 11
           S L+
Sbjct: 70  SALE 73


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