BLASTX nr result
ID: Coptis21_contig00035494
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00035494 (392 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 ... 180 1e-43 emb|CBI22790.3| unnamed protein product [Vitis vinifera] 178 5e-43 ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative... 175 4e-42 gb|ABK92490.1| unknown [Populus trichocarpa] 172 3e-41 ref|XP_002323387.1| predicted protein [Populus trichocarpa] gi|2... 172 3e-41 >ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 homolog [Vitis vinifera] Length = 260 Score = 180 bits (456), Expect = 1e-43 Identities = 86/105 (81%), Positives = 98/105 (93%) Frame = +3 Query: 78 MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQ 257 MPQGDYI+LHRKR+GYRPDHFERKRK++AREVH+ S AQK +G KGK +AK+RYAEKAQ Sbjct: 1 MPQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQ 60 Query: 258 MKRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392 MK+TLAMHEESSSRRKVDD+VHEGA+PAYLLDRE TTRAKVLSN+ Sbjct: 61 MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNT 105 >emb|CBI22790.3| unnamed protein product [Vitis vinifera] Length = 280 Score = 178 bits (451), Expect = 5e-43 Identities = 85/104 (81%), Positives = 97/104 (93%) Frame = +3 Query: 81 PQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQM 260 PQGDYI+LHRKR+GYRPDHFERKRK++AREVH+ S AQK +G KGK +AK+RYAEKAQM Sbjct: 22 PQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQM 81 Query: 261 KRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392 K+TLAMHEESSSRRKVDD+VHEGA+PAYLLDRE TTRAKVLSN+ Sbjct: 82 KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNT 125 >ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative [Ricinus communis] gi|223526141|gb|EEF28481.1| TGF-beta-inducible nuclear protein, putative [Ricinus communis] Length = 260 Score = 175 bits (443), Expect = 4e-42 Identities = 84/105 (80%), Positives = 96/105 (91%) Frame = +3 Query: 78 MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQ 257 MPQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQKT+G KGK AK+ YAEKA Sbjct: 1 MPQGDYIELHRKRHGYRLDHFERKRKKEAREVHKRSERAQKTLGIKGKMIAKKNYAEKAL 60 Query: 258 MKRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392 MK+TLAMHEESSSRRKVDD+VHEGA+PAYLLDRE TTRAK+LSN+ Sbjct: 61 MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRENTTRAKILSNT 105 >gb|ABK92490.1| unknown [Populus trichocarpa] Length = 260 Score = 172 bits (436), Expect = 3e-41 Identities = 82/105 (78%), Positives = 95/105 (90%) Frame = +3 Query: 78 MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQ 257 MPQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQK +G KGK AK+ YAEKA Sbjct: 1 MPQGDYIELHRKRHGYRLDHFERKRKKEAREVHKHSERAQKALGIKGKMIAKKNYAEKAL 60 Query: 258 MKRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392 MK+TLAMHEES+SRRKVDD+VH+GA+PAYLLDRE TTRAK+LSNS Sbjct: 61 MKKTLAMHEESTSRRKVDDDVHDGAIPAYLLDRENTTRAKILSNS 105 >ref|XP_002323387.1| predicted protein [Populus trichocarpa] gi|222868017|gb|EEF05148.1| predicted protein [Populus trichocarpa] Length = 260 Score = 172 bits (435), Expect = 3e-41 Identities = 82/105 (78%), Positives = 95/105 (90%) Frame = +3 Query: 78 MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQ 257 MPQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQK +G KGK AK+ YAEKA Sbjct: 1 MPQGDYIELHRKRHGYRLDHFERKRKKEAREVHKHSERAQKALGIKGKMIAKKNYAEKAL 60 Query: 258 MKRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392 MK+TLAMHEES+SRRKVDD+VH+GA+PAYLLDRE TTRAK+LSNS Sbjct: 61 MKKTLAMHEESTSRRKVDDDVHDGAVPAYLLDRENTTRAKILSNS 105