BLASTX nr result

ID: Coptis21_contig00035494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035494
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 ...   180   1e-43
emb|CBI22790.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative...   175   4e-42
gb|ABK92490.1| unknown [Populus trichocarpa]                          172   3e-41
ref|XP_002323387.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>ref|XP_002266163.1| PREDICTED: ribosome biogenesis protein NSA2 homolog [Vitis
           vinifera]
          Length = 260

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/105 (81%), Positives = 98/105 (93%)
 Frame = +3

Query: 78  MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQ 257
           MPQGDYI+LHRKR+GYRPDHFERKRK++AREVH+ S  AQK +G KGK +AK+RYAEKAQ
Sbjct: 1   MPQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQ 60

Query: 258 MKRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392
           MK+TLAMHEESSSRRKVDD+VHEGA+PAYLLDRE TTRAKVLSN+
Sbjct: 61  MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNT 105


>emb|CBI22790.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  178 bits (451), Expect = 5e-43
 Identities = 85/104 (81%), Positives = 97/104 (93%)
 Frame = +3

Query: 81  PQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQM 260
           PQGDYI+LHRKR+GYRPDHFERKRK++AREVH+ S  AQK +G KGK +AK+RYAEKAQM
Sbjct: 22  PQGDYIDLHRKRHGYRPDHFERKRKKEAREVHKRSEIAQKALGIKGKMFAKKRYAEKAQM 81

Query: 261 KRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392
           K+TLAMHEESSSRRKVDD+VHEGA+PAYLLDRE TTRAKVLSN+
Sbjct: 82  KKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRETTTRAKVLSNT 125


>ref|XP_002533899.1| TGF-beta-inducible nuclear protein, putative [Ricinus communis]
           gi|223526141|gb|EEF28481.1| TGF-beta-inducible nuclear
           protein, putative [Ricinus communis]
          Length = 260

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/105 (80%), Positives = 96/105 (91%)
 Frame = +3

Query: 78  MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQ 257
           MPQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQKT+G KGK  AK+ YAEKA 
Sbjct: 1   MPQGDYIELHRKRHGYRLDHFERKRKKEAREVHKRSERAQKTLGIKGKMIAKKNYAEKAL 60

Query: 258 MKRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392
           MK+TLAMHEESSSRRKVDD+VHEGA+PAYLLDRE TTRAK+LSN+
Sbjct: 61  MKKTLAMHEESSSRRKVDDDVHEGAVPAYLLDRENTTRAKILSNT 105


>gb|ABK92490.1| unknown [Populus trichocarpa]
          Length = 260

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/105 (78%), Positives = 95/105 (90%)
 Frame = +3

Query: 78  MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQ 257
           MPQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQK +G KGK  AK+ YAEKA 
Sbjct: 1   MPQGDYIELHRKRHGYRLDHFERKRKKEAREVHKHSERAQKALGIKGKMIAKKNYAEKAL 60

Query: 258 MKRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392
           MK+TLAMHEES+SRRKVDD+VH+GA+PAYLLDRE TTRAK+LSNS
Sbjct: 61  MKKTLAMHEESTSRRKVDDDVHDGAIPAYLLDRENTTRAKILSNS 105


>ref|XP_002323387.1| predicted protein [Populus trichocarpa] gi|222868017|gb|EEF05148.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/105 (78%), Positives = 95/105 (90%)
 Frame = +3

Query: 78  MPQGDYIELHRKRYGYRPDHFERKRKRDAREVHEVSRKAQKTIGGKGKRYAKQRYAEKAQ 257
           MPQGDYIELHRKR+GYR DHFERKRK++AREVH+ S +AQK +G KGK  AK+ YAEKA 
Sbjct: 1   MPQGDYIELHRKRHGYRLDHFERKRKKEAREVHKHSERAQKALGIKGKMIAKKNYAEKAL 60

Query: 258 MKRTLAMHEESSSRRKVDDEVHEGALPAYLLDREQTTRAKVLSNS 392
           MK+TLAMHEES+SRRKVDD+VH+GA+PAYLLDRE TTRAK+LSNS
Sbjct: 61  MKKTLAMHEESTSRRKVDDDVHDGAVPAYLLDRENTTRAKILSNS 105


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