BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035449
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512931.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_003598394.1| F-box protein [Medicago truncatula] gi|35834...    71   1e-10
ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|35548...    70   1e-10
gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction doma...    70   1e-10
ref|XP_003617917.1| F-box protein [Medicago truncatula] gi|35551...    70   2e-10

>ref|XP_002512931.1| conserved hypothetical protein [Ricinus communis]
           gi|223547942|gb|EEF49434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
 Frame = -3

Query: 445 DILPEDAVFQILLWLPVKSLLRFKSVCKSWCALIQSSYFVXXXXXXXXXHPVVKDNNCNL 266
           D LPED + +ILL LP+  L+RF+ VCKSWCAL+    F+         H    ++   +
Sbjct: 3   DYLPEDLIIKILLRLPMLYLVRFRCVCKSWCALLSDPKFIYKKLLCNGEHQNYDNSPHPV 62

Query: 265 AVLSSAGSPSCFNLSLLSGERFEVSTNSDLPAFPN--KANLNQINMV--ACNGVICLHSY 98
            V     S   +  S+LS E FE+S   ++P +P     N++ I++V  + NG ICL   
Sbjct: 63  VVKRRDMSTRNYFFSVLSCETFEMSAPKEIP-YPKDIMENMSDISIVGSSSNGFICLRDL 121

Query: 97  VED-------YNSGICTMNVSLWNPATKQFWDLPKTPSS 2
            +          S     NV LWNP T +   +P++ +S
Sbjct: 122 YDPDIVLSRWRYSYETDCNVILWNPLTSEIKIIPQSNAS 160


>ref|XP_003598394.1| F-box protein [Medicago truncatula]
           gi|358348378|ref|XP_003638224.1| F-box protein [Medicago
           truncatula] gi|355487442|gb|AES68645.1| F-box protein
           [Medicago truncatula] gi|355504159|gb|AES85362.1| F-box
           protein [Medicago truncatula]
          Length = 370

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
 Frame = -3

Query: 439 LPEDAVFQILLWLPVKSLLRFKSVCKSWCALIQSSYFVXXXXXXXXXHPVVKDNNCNLAV 260
           +P+D VF IL  L VKS+ RF   CKSW +L ++  F+               ++  L +
Sbjct: 14  IPDDIVFSILSKLSVKSIKRFSCACKSWSSLFENPNFINKFRNNLLSKSHPLYDDACLIL 73

Query: 259 LSSAGSPSCFNLSLLSGERFEVSTNSDL-PAFPNKANLNQINMV--ACNGVICLHSYVED 89
              +G    +N+ LLSG+RFE     DL P+ P +   + I ++  A NG +C+     D
Sbjct: 74  NHFSGPDYHWNVYLLSGDRFENKVKLDLPPSLPIENGFDYIRILGYAINGTLCIF----D 129

Query: 88  YNSGICTMNVSLWNPATKQFWDLP 17
           Y++      V+LWNPAT++   +P
Sbjct: 130 YHT---NTRVALWNPATQEVKAIP 150


>ref|XP_003594135.1| F-box protein [Medicago truncatula] gi|355483183|gb|AES64386.1|
           F-box protein [Medicago truncatula]
          Length = 460

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
 Frame = -3

Query: 439 LPEDAVFQILLWLPVKSLLRFKSVCKSWCALIQSSYFVXXXXXXXXXHPVVKDNNCNLA- 263
           +P+D    IL  LP+KSL RF+S CKSW  L Q+ YF+           +++ N+ + A 
Sbjct: 16  IPDDVAISILSNLPLKSLKRFESTCKSWSMLFQNPYFMKIYRNR-----IIQGNHSDHAD 70

Query: 262 ---------VLSSAGSPSC-----FNLSLLSGERFE--VSTNSDLPAFPNKANLNQINMV 131
                    VL +   P         L  +SGE+FE  V  N  LP      ++  +  +
Sbjct: 71  ASLILRHTIVLDNVVRPVVEPLFQSTLYFISGEKFENRVKLNLSLPFQVLGQDIYILGSI 130

Query: 130 ACNGVICLHSYVEDYNSGICTMNVSLWNPATKQFWDLPKTP 8
           + NG +CL + ++D    +      LWNP TK+F  +P +P
Sbjct: 131 SINGFLCLSNLLDDERKAV------LWNPTTKEFIVIPSSP 165


>gb|ABN09744.1| Cyclin-like F-box; F-box protein interaction domain [Medicago
           truncatula]
          Length = 438

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
 Frame = -3

Query: 439 LPEDAVFQILLWLPVKSLLRFKSVCKSWCALIQSSYFVXXXXXXXXXHPVVKDNNCNLA- 263
           +P+D    IL  LP+KSL RF+S CKSW  L Q+ YF+           +++ N+ + A 
Sbjct: 16  IPDDVAISILSNLPLKSLKRFESTCKSWSMLFQNPYFMKIYRNR-----IIQGNHSDHAD 70

Query: 262 ---------VLSSAGSPSC-----FNLSLLSGERFE--VSTNSDLPAFPNKANLNQINMV 131
                    VL +   P         L  +SGE+FE  V  N  LP      ++  +  +
Sbjct: 71  ASLILRHTIVLDNVVRPVVEPLFQSTLYFISGEKFENRVKLNLSLPFQVLGQDIYILGSI 130

Query: 130 ACNGVICLHSYVEDYNSGICTMNVSLWNPATKQFWDLPKTP 8
           + NG +CL + ++D    +      LWNP TK+F  +P +P
Sbjct: 131 SINGFLCLSNLLDDERKAV------LWNPTTKEFIVIPSSP 165


>ref|XP_003617917.1| F-box protein [Medicago truncatula] gi|355519252|gb|AET00876.1|
           F-box protein [Medicago truncatula]
          Length = 394

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
 Frame = -3

Query: 439 LPEDAVFQILLWLPVKSLLRFKSVCKSWCALIQSSYFVXXXXXXXXXHPVVKDNNCNLAV 260
           LPED VF IL  LPVKSL RF+ V KSW  L   +YF+           + KD++ +L +
Sbjct: 17  LPEDIVFSILSKLPVKSLRRFECVSKSWSLLFDDNYFMNMYRNYF----LSKDSSSSLLL 72

Query: 259 LSSAGSPSC-----FNLSLLSGERFE-----------VSTNSDLPAFPNKANLNQINMVA 128
               G         +NL  +SGERFE           V T  D   +    +   ++  +
Sbjct: 73  HVEGGDYKYGEYPPYNLYSVSGERFEKRVKLDWPNPFVKTRGDPSPYGTVLSSKLLSCAS 132

Query: 127 CNGVICLHSYVEDYNSGICTMNVSLWNPATKQFWDLPKT 11
            NG +C+HS    Y   +  +   +WNP T +F  +P +
Sbjct: 133 VNGTLCIHS---SYGGNVMFI---IWNPTTDEFKVIPSS 165