BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035225
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]    114   6e-24
emb|CAN69776.1| hypothetical protein VITISV_042272 [Vitis vinifera]   112   3e-23
emb|CAN66943.1| hypothetical protein VITISV_010070 [Vitis vinifera]   111   5e-23
gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]    111   7e-23
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    111   7e-23

>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/128 (39%), Positives = 77/128 (60%)
 Frame = +2

Query: 2   EQVRLRVFPFTLADKAAAWLTAQRPNSVNTWENLVVLFMEQYYPPQKTDEMLQKIHFFRQ 181
           + ++LR+FPF+L DKA AWL +  P S+ TW+ L   F+ +Y+PP KT ++  +I  F Q
Sbjct: 7   DAIKLRLFPFSLRDKARAWLQSLPPGSITTWDQLSEAFLAKYFPPSKTAQLRNQITTFTQ 66

Query: 182 NPQESFTEAWNRFTDLLIECPHHSLGKDTLVRAFFKGLSQHHKETLDIMTGGSFLTKSAT 361
              ES  +AW R+ DLL  CPHH L    ++  F+ GL  + + T+D   GG+ + KS  
Sbjct: 67  KEGESLYDAWERYKDLLRMCPHHGLEDWLIIHTFYNGLLYNTRMTVDAAAGGALMNKSVR 126

Query: 362 EAYTFLED 385
           +A   +ED
Sbjct: 127 DAKQLIED 134


>emb|CAN69776.1| hypothetical protein VITISV_042272 [Vitis vinifera]
          Length = 934

 Score =  112 bits (280), Expect = 3e-23
 Identities = 50/124 (40%), Positives = 76/124 (61%)
 Frame = +2

Query: 8   VRLRVFPFTLADKAAAWLTAQRPNSVNTWENLVVLFMEQYYPPQKTDEMLQKIHFFRQNP 187
           +RL++FPFTL DKA  WL + RP S+ TW NL V F+++++P  +T+ + ++I  F    
Sbjct: 30  MRLKLFPFTLKDKAKIWLNSLRPRSIRTWTNLQVKFLKKFFPTHRTNGLKRQISNFLAKE 89

Query: 188 QESFTEAWNRFTDLLIECPHHSLGKDTLVRAFFKGLSQHHKETLDIMTGGSFLTKSATEA 367
            E F E W ++ + +  CPHH      LV  F+ G+S   K+ L+IM GG F++K+  EA
Sbjct: 90  NEKFYECWEKYMEAINACPHHGFDTWLLVSYFYHGMSSSMKQLLEIMCGGDFMSKNPEEA 149

Query: 368 YTFL 379
             FL
Sbjct: 150 MDFL 153


>emb|CAN66943.1| hypothetical protein VITISV_010070 [Vitis vinifera]
          Length = 365

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/126 (39%), Positives = 74/126 (58%)
 Frame = +2

Query: 8   VRLRVFPFTLADKAAAWLTAQRPNSVNTWENLVVLFMEQYYPPQKTDEMLQKIHFFRQNP 187
           +RL++FPFTL DKA  WL + RP S+ TW +L   F+++++P  +T+ + ++I  F    
Sbjct: 91  MRLKLFPFTLKDKARIWLNSSRPRSIRTWTDLQAEFLKKFFPTHRTNGLKRQISNFSAKE 150

Query: 188 QESFTEAWNRFTDLLIECPHHSLGKDTLVRAFFKGLSQHHKETLDIMTGGSFLTKSATEA 367
            E F E W R+ D +  CPHH      LV  F+ G+S   K+ L  M GG F++K+  EA
Sbjct: 151 NEKFYECWERYMDAINACPHHGFDTWLLVSYFYDGMSSSMKQLLKTMCGGDFMSKNLEEA 210

Query: 368 YTFLED 385
             FL D
Sbjct: 211 MDFLND 216


>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/132 (40%), Positives = 81/132 (61%)
 Frame = +2

Query: 2   EQVRLRVFPFTLADKAAAWLTAQRPNSVNTWENLVVLFMEQYYPPQKTDEMLQKIHFFRQ 181
           + ++LR  PF L DKA  WL +   NS++TWE  V +F+++++P  KT ++   I  F+ 
Sbjct: 75  DAIKLRFIPFALKDKAKKWLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLRNSIQNFKI 134

Query: 182 NPQESFTEAWNRFTDLLIECPHHSLGKDTLVRAFFKGLSQHHKETLDIMTGGSFLTKSAT 361
            P E F + ++RF DLLI+CPHH L K  L +  ++GL    K +L+ M  G F+ K+A 
Sbjct: 135 VPGEPFWKYFDRFKDLLIQCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQGDFMRKNAD 194

Query: 362 EAYTFLEDQPKK 397
           EA+ FLE   +K
Sbjct: 195 EAWEFLESLSEK 206


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/132 (40%), Positives = 81/132 (61%)
 Frame = +2

Query: 2   EQVRLRVFPFTLADKAAAWLTAQRPNSVNTWENLVVLFMEQYYPPQKTDEMLQKIHFFRQ 181
           + ++LR  PF L DKA  WL +   NS++TWE  V +F+++++P  KT ++   I  F+ 
Sbjct: 7   DAIKLRFIPFALKDKAKKWLYSLPTNSISTWEEFVTVFLKKFFPIHKTVKLRNSIQNFKI 66

Query: 182 NPQESFTEAWNRFTDLLIECPHHSLGKDTLVRAFFKGLSQHHKETLDIMTGGSFLTKSAT 361
            P E F + ++RF DLLI+CPHH L K  L +  ++GL    K +L+ M  G F+ K+A 
Sbjct: 67  VPGEPFWKYFDRFKDLLIQCPHHGLEKWRLCQVIYEGLDYSSKTSLESMCQGDFMRKNAD 126

Query: 362 EAYTFLEDQPKK 397
           EA+ FLE   +K
Sbjct: 127 EAWEFLESLSEK 138